| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2429 |
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| Symbol | |
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| ID | 8358584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2988300 |
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| End bp | 2989058 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964615 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003122121 |
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| Protein GI | 256421468 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.58328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.46661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAC AGAAAATAGC ACTGGTAACC GGCGGTAGCC GTGGATTAGG CAAGAATGCA
GTACTTGAAC TGGCAAAAGA CGGACATCAT GTCGTGTTTA CTTATCATAG TAAAAAAGAA
GAAGCACAGG AAGTAGTAGC AGCAGTACAG CAATTCAATG TAGAGGCAGT AGCTTTACAA
CTGGATGTGG CGGCTGTGAA ATCATTCCCT GCTTTTAAAA CAGCGCTGCA ACAGGCATTA
AAAGAAAAAT GGAATGCAAC GCATATTAAT TTCCTGGTGA ACAATGCCGG TATAGACCGT
TATTCACAGT TCCCCGATAC GACAGAAGAA GATTTTGATG CATTGATGAA TACCCATTTC
AAAGGGGCGT ATTTCCTCAC ACAAACATTA CTGGATACCA TCGCTGATGG CGGTCGTATC
GTTAACTTCT CTACCGGTCT GGCAAGATTT GTCACACCTG GTTATGCAGC TTATGCTTCT
ATGAAAGCAG CTGTGTATAA CTTCACAAAG TACCTCGCTA AAGAACTGGG TAAAAGAGGG
ATTACTGCGA ATGTGGTAGC GCCTGGTCCT ATTGAGACAG ATTTCACCAG GAATGCATTT
GAAATCCCGG GTGTGAAAGA TCACCTGGTC GGACAAACTG CATTAGGTCG TATGGGTGTT
CCGGATGATA TCGGAGGCAT TGTGGCTTTC CTTTGCAGCG AAAGAGCAAG ATGGATCACC
GCACAGTGTA TAGAGGCATC TGGTGGACTG TTCCTCTAG
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| Protein sequence | MATQKIALVT GGSRGLGKNA VLELAKDGHH VVFTYHSKKE EAQEVVAAVQ QFNVEAVALQ
LDVAAVKSFP AFKTALQQAL KEKWNATHIN FLVNNAGIDR YSQFPDTTEE DFDALMNTHF
KGAYFLTQTL LDTIADGGRI VNFSTGLARF VTPGYAAYAS MKAAVYNFTK YLAKELGKRG
ITANVVAPGP IETDFTRNAF EIPGVKDHLV GQTALGRMGV PDDIGGIVAF LCSERARWIT
AQCIEASGGL FL
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