| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2427 |
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| Symbol | |
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| ID | 8358582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2985698 |
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| End bp | 2987422 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644964613 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_003122119 |
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| Protein GI | 256421466 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0700684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.107215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAA CAATAGCTGC TCAAATAGTA GAACAACTGA TAGCCGCCGG GGTAAAAAGA
GTACACGGCG TGGTAGGCGA CTCTCTCAAC AGTATTACCG ACGAGATACG CCAGCACAAA
GAACTGGAAT GGATCCATTA CAGGCATGAA GAGGCCGCTG CTTTTGCCGC AGGTGCAGAA
GCACAACTCA CCGGCCAGCT GGCAGTATGT GCCGGTAGCT GCGGCCCCGG TAATATGCAC
CTGATTAACG GCCTCTACGA TGCACACCGT AGTATGGCGC CCGTATTAGC GATTGCCGCT
CAGATCCCCA GTACTGAAAT AGGTACGTCC TATTTCCAGG AAACAAGACC GGAAGCCCTC
TTCCGGGAAT GTAGCCACTA TTGTGAAACG ATTGCCTCTG CGCGACAGAT GCCCCGGGTA
TTACAAACCG CCATGCAACA TGCCATCGGA TTAGGCGGTG TAGCCGTGAT TGCCCTCTCG
GGGGACGTCG CCACACAGAC AGTAGACGAT AACGGACTGG AGCATTCCCT GCTGGTCAGC
CGTCCTGCCA TCCGGCCCTC TGATACAGAA CTGCACAAAC TGGCTGACCT GATTAATGCA
GCTGAAAAGG TCACCCTCCT CTGTGGACGT GGCTGCGCAG GCGCACATGA TGAACTGATT
GCTTTGGGTG AAAAGATCCT CTCGCCTATG GTACATGCCC TGAGAGGAAA GGAATTTGTG
GAGTATGACA ATCCTTTTGA TGTGGGGATG ACTGGACTGA TCGGTTTCTC TTCTGGTTAT
CATGCCATGG AGCGCAGTGA CCTGGTCATC ATGCTCGGTA CTGATTTCCC TTACAAGGAC
TGGTTCCCCT CCAAAGCGAA GATCGTCCAG GTGGACATCC GGGCAGAACG CCTGGGCAGA
CGCTGTGCCA TCTCCCTTGG ACTGGTAGGC GATGTAAAGG AAACGCTCTA TTGCCTGCTG
CCCTTACTCA AACAAAAAAC GGACAGGGCC TTCCTGGATA AATGTATTAC CCACTATCAT
AACAGCCGGC AATCTTTGGA AAGTCATGCA ACCGGTAAGG CAGATGCCAC GCCTATTCAT
CCGGAGTATC TGACGCATAT CCTCAACGAG CTGGCGGATC CGGATGCCAT CTTTACGGCG
GATGTGGGAG AACCTACGGT TTGGGCAGCC CGTTATCTGA GGATGAAAAA AGGACAACGC
CTGCTGGGAT CATTTAACCA CGGTTCTATG GCCAGTGCCA TGCCACAGGC AATCGGTGCA
CAGCTGACCC ATCCCGGCAG ACAAGTCATT TCCCTCTCCG GCGATGGTGG TTTTTCCATG
CTTATGGGAG ATATTCTAAC CATCGTGCAG TATAACCTGC CGGTTAAGAT TGTCGTGTTT
AATAACAGTT CCCTGGGCTT TGTGGCCATG GAAATGAAAG TAGCCGGTCT GCCGCCTTAC
GGTACCGACC TGAAAAACCC TGATTTTGCC CGTATGGCGG AAGCGATCGG CATAAAGGGA
ATACGTGTGG AGAACCCGGC GAATGTACGT ACCGCCCTGC AAAAGGCGTT TGAACATGAT
GGGCCGGTAC TGATAGATGC TGTTGTGAAT CCATCCGTAC TGGTCATGCC GCCCAAGATC
GAATTCTCCC AGGCTAAAGG TTTTGGTATG TATGCGCTGA AACAGGTATT CAATGGTAAT
GGCAAGGAAG TGTGGGATAC GCTGACCTCT AATTTCCTGG ATTAG
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| Protein sequence | MPKTIAAQIV EQLIAAGVKR VHGVVGDSLN SITDEIRQHK ELEWIHYRHE EAAAFAAGAE
AQLTGQLAVC AGSCGPGNMH LINGLYDAHR SMAPVLAIAA QIPSTEIGTS YFQETRPEAL
FRECSHYCET IASARQMPRV LQTAMQHAIG LGGVAVIALS GDVATQTVDD NGLEHSLLVS
RPAIRPSDTE LHKLADLINA AEKVTLLCGR GCAGAHDELI ALGEKILSPM VHALRGKEFV
EYDNPFDVGM TGLIGFSSGY HAMERSDLVI MLGTDFPYKD WFPSKAKIVQ VDIRAERLGR
RCAISLGLVG DVKETLYCLL PLLKQKTDRA FLDKCITHYH NSRQSLESHA TGKADATPIH
PEYLTHILNE LADPDAIFTA DVGEPTVWAA RYLRMKKGQR LLGSFNHGSM ASAMPQAIGA
QLTHPGRQVI SLSGDGGFSM LMGDILTIVQ YNLPVKIVVF NNSSLGFVAM EMKVAGLPPY
GTDLKNPDFA RMAEAIGIKG IRVENPANVR TALQKAFEHD GPVLIDAVVN PSVLVMPPKI
EFSQAKGFGM YALKQVFNGN GKEVWDTLTS NFLD
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