Gene Cpin_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2425 
Symbol 
ID8358580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2984008 
End bp2984574 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content44% 
IMG OID644964611 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_003122117 
Protein GI256421464 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.169407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGA TAATCGTATC TATGAATGTT ACGCTGGACG GATTTATGGC GGGTATTAAT 
GGTGAACTGG ACTGGCATTT TCCACTCTGG AACGAGGAAA TGTCGCTCTA TATCTGTCAT
CAGCTGGGAA AGATGGATAC CATCCTGCTG GGCAGGCGTA GCTATGAACG GATGGCCCGT
TACTGGCCGG TAAGGACATT TACCGGGGTA GAACTGGAAT ATGCAGACCT CATGAACAAC
CATACAAAAG TCGTATTCTC TCATACATTG GAAAGTGCCG ACTGGCAGAA TACCCGGCTG
ATAAAAGGAA ATATCAGCGA AGAAGTCCTG AAACTGAAAC AATCTCCCGG AAAGGATATG
ATCATCTATG GTAGCAGCAG TATTGTACAA TCATTCATCC GGCAGGGACT GATTGACGAA
TTTCAGATAT GGGTACACCC GGTGTTTATC CAGCATGGAG TGCCGATGTT CAGGGATATG
GAAGAGAAGG TGAGGTTAGA GTTTATGCGG ACAAGGTCTT TTAGTAGTGG AGTAGTGATC
CTTTATTATA AAATAATTAG GAATTAG
 
Protein sequence
MRKIIVSMNV TLDGFMAGIN GELDWHFPLW NEEMSLYICH QLGKMDTILL GRRSYERMAR 
YWPVRTFTGV ELEYADLMNN HTKVVFSHTL ESADWQNTRL IKGNISEEVL KLKQSPGKDM
IIYGSSSIVQ SFIRQGLIDE FQIWVHPVFI QHGVPMFRDM EEKVRLEFMR TRSFSSGVVI
LYYKIIRN