Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2425 |
Symbol | |
ID | 8358580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2984008 |
End bp | 2984574 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644964611 |
Product | bifunctional deaminase-reductase domain protein |
Protein accession | YP_003122117 |
Protein GI | 256421464 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.169407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAAAGA TAATCGTATC TATGAATGTT ACGCTGGACG GATTTATGGC GGGTATTAAT GGTGAACTGG ACTGGCATTT TCCACTCTGG AACGAGGAAA TGTCGCTCTA TATCTGTCAT CAGCTGGGAA AGATGGATAC CATCCTGCTG GGCAGGCGTA GCTATGAACG GATGGCCCGT TACTGGCCGG TAAGGACATT TACCGGGGTA GAACTGGAAT ATGCAGACCT CATGAACAAC CATACAAAAG TCGTATTCTC TCATACATTG GAAAGTGCCG ACTGGCAGAA TACCCGGCTG ATAAAAGGAA ATATCAGCGA AGAAGTCCTG AAACTGAAAC AATCTCCCGG AAAGGATATG ATCATCTATG GTAGCAGCAG TATTGTACAA TCATTCATCC GGCAGGGACT GATTGACGAA TTTCAGATAT GGGTACACCC GGTGTTTATC CAGCATGGAG TGCCGATGTT CAGGGATATG GAAGAGAAGG TGAGGTTAGA GTTTATGCGG ACAAGGTCTT TTAGTAGTGG AGTAGTGATC CTTTATTATA AAATAATTAG GAATTAG
|
Protein sequence | MRKIIVSMNV TLDGFMAGIN GELDWHFPLW NEEMSLYICH QLGKMDTILL GRRSYERMAR YWPVRTFTGV ELEYADLMNN HTKVVFSHTL ESADWQNTRL IKGNISEEVL KLKQSPGKDM IIYGSSSIVQ SFIRQGLIDE FQIWVHPVFI QHGVPMFRDM EEKVRLEFMR TRSFSSGVVI LYYKIIRN
|
| |