Gene Cpin_2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2415 
Symbol 
ID8358570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2971214 
End bp2972011 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content44% 
IMG OID644964601 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_003122107 
Protein GI256421454 
COG category[I] Lipid transport and metabolism 
COG ID[COG0671] Membrane-associated phospholipid phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0206905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.430612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAA AAGTGTTCAG CTTTTTGCTG CCTGCTATTG TCTTTTGTGC TCAGTACTCA 
ACCGCACAGC AATCTTCACT GACAACATTA GAGCTATCCG AAACTGATTC CGTGTATGGT
TACGTGCAAC CACCTTCCAA ACATCTTGAT GGTCGTTTAA TTGCTATTCC GGTTACTTTT
ATTGCTTACG GCGCTGCTTC TCTGAAACTG GGTGATCTGA AGAAGCTGAA TACGCATATG
AATAATGAGA TCTTCCTGGA AAGCCGCCAC AAACCCTTAC ATTTTGATAA TTATCTGCAA
TACGGACCTG CGGTGATGGT ATATGGCCTG AACCTGGTGG GGATAAAGGG AAAGAATAAT
TTTATCGATC GTACGATGAT CTATGGTATC TCCAATGCCA TCCTGGGAGC TACCGTAATG
ACGACAAAAC ACTTCACCCA TGAGTGGAGA CCTGATGGCT CCAATCAGAT GTCATTTCCT
TCCGGACATA CCGCTACTGC TTTTGCCGCA GCAGAATTCA TGAGAAGAGA ATACCAGGAC
AAATCCGTAT GGTACGGTGT TGCCGGTTAT GCGATGGCAG TTACAACGGG TTATATGCGT
ATGTACAATA ACAGGCACTG GTTTGGAGAT GTAGTGGCAG GTGCTGGTGT AGGTATTCTG
TCAACAGATC TGGCTTATTT TCTCTATCCT AAGATGAAAC GGATCTTTAC CGGTACAAAA
GATAACGGGG CTACCGTTGT TACGCCGACT TACCACGATG GCGCTGTGGG ATTATCCTTG
GTGCATATGT TCAAATAA
 
Protein sequence
MLKKVFSFLL PAIVFCAQYS TAQQSSLTTL ELSETDSVYG YVQPPSKHLD GRLIAIPVTF 
IAYGAASLKL GDLKKLNTHM NNEIFLESRH KPLHFDNYLQ YGPAVMVYGL NLVGIKGKNN
FIDRTMIYGI SNAILGATVM TTKHFTHEWR PDGSNQMSFP SGHTATAFAA AEFMRREYQD
KSVWYGVAGY AMAVTTGYMR MYNNRHWFGD VVAGAGVGIL STDLAYFLYP KMKRIFTGTK
DNGATVVTPT YHDGAVGLSL VHMFK