Gene Cpin_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2406 
Symbol 
ID8358561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2961293 
End bp2962243 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content46% 
IMG OID644964592 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_003122098 
Protein GI256421445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.111286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.403341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAC CTGTTCCTGC CAGGCCTACA ACTGCATTTT TAGATAGGCG ATATATGCTG 
ATCGTTACCG CGGTCAGCAT TGCCTATCTG CTGCTTTCCG CCTGGTTGCT TGGATTTAAG
ACCGATCAGC TCTGGTTGAT AGCTATTTTT AATGGTTGTT ATTATGCATC CCGGCCTACC
CGCCGGTTTA TATTAGGATT CTCGATTTTT ATTTTCTACT GGATCGTGTT TGACTATATG
AAGGCATTCC CGAACTATTT AACGGGACCC GTGCATATAC AGGACATTTA TGAGACAGAA
AAGGCCTGGT TTGGTATTAT GCTGGATGGC GTGAGAGTAA CGCCGAATGA ATACTGGTTA
CACAACACCC AGGTATGGCT GGATGTGCTG ACCGGTTCTT TTTACCTCTG CTGGGTGCCG
GTACCGCTGG CATTCGCTGC TTACCTGTTT TACAAAGACA GACTTCAGTT TATACATTTC
GCCCTGACAT TCATATTGGT GAACTGGATC GGGTATATTG TGTATTACAC GTATCCTGCT
GCTCCACCCT GGTATGTACA GGTACATGGC TTCGATTTCA TCGCTAATAC ACTGAGTAAT
GCCGCCGGAC TGCTAAGATT CGACGACGCT TTGCATGTGA ATCTCTTCGG TTCGCTTTAT
GCGAAAGGAT CAAATGTATT TGCCGCGATG CCATCACTGC ATTCAGCCTA TCCGCTGATC
GTATTCTTTT ATGCAAGAAA GACGACACAT ATCTTCTTTA CGACCATCTT CGGGATTATC
GCCCTGGGTA TCTGGTTTGC AGCCGTTTAT ACCAGTCACC ACTATGTGCT GGATGTAATG
GCAGGCATTA CCTGTGCAAG TGCCGGTATT ACCTTATACA GACTTGTATT GATGAAAAGT
GTGGCTTATA ACGAGCGGAT CGCGAAGTTC TATTCCGTGA TCACGAAGTA G
 
Protein sequence
MDAPVPARPT TAFLDRRYML IVTAVSIAYL LLSAWLLGFK TDQLWLIAIF NGCYYASRPT 
RRFILGFSIF IFYWIVFDYM KAFPNYLTGP VHIQDIYETE KAWFGIMLDG VRVTPNEYWL
HNTQVWLDVL TGSFYLCWVP VPLAFAAYLF YKDRLQFIHF ALTFILVNWI GYIVYYTYPA
APPWYVQVHG FDFIANTLSN AAGLLRFDDA LHVNLFGSLY AKGSNVFAAM PSLHSAYPLI
VFFYARKTTH IFFTTIFGII ALGIWFAAVY TSHHYVLDVM AGITCASAGI TLYRLVLMKS
VAYNERIAKF YSVITK