| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2399 |
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| Symbol | |
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| ID | 8358554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2953588 |
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| End bp | 2954571 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964585 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003122091 |
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| Protein GI | 256421438 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.131768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0846691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTC GCGTACTGAT AACAGGTGCC AGCGGTTTTG TAGGATATCA TCTGGTGGAG
GCAGCCCTCG ATGCAGGAAT GGAAGTTTAC GCTGCTGTTC GCGCATCGAG CAATGTCTCC
CACCTGAACC ATTTACAGGT AAATTATGTT TATCCTGATT TCAGCCGCAA AGAGGCGCTG
ATAGAAATGA TAAAAGAACA CCGGTTTGAT TATATTATCC ACGGTGCAGG TATAACAAAA
GCAAGGTCTT TAGACGAATA TAACAAAGTT AATGCAGGGT ATACCCAAAA CCTGGCGCAG
GCAGTCAGCG AGTCAGGCAT ACCGCTCAAG AAATTTTTAT TTATCAGCAG TCTGGCGGCC
GTAGGCCCCA TCGCATATGA TGCCAGCTGG CCCGTACCGG ATGTAATAAC ACCCAGCCCG
GTCACCAGTT ACGGAAAAAG TAAATTACTG GCAGAAGAAT TCCTGGGTGC TATTTCGAAT
GTACCCTGGG TTATATTAAG GCCCACTGCT GTATACGGGC CGCGCGAAAG AGACCTTTTC
GTATTGTTCA AAACATTCAG ACGGGGTTTG GAACCTTATA TGGGCAGAGG TGCCCAGTGG
CTGAGTTTTG TGTATGTAAA AGACCTCGCA GATGCAGCTA TACTGGCGTT AAAGGCGCCG
GTATCAGGAG TCGCTTATAA CATTTCAGAT GGTAACAGTT ACGATCGTTA CGCACTGGCA
GCGATTATCA AACAACACCT GAAGCTGCGC ACACTTCGCA TTCATTTGCC TTTGCCTGTC
ATTAAGATCG TTGCCGCTAT TTCAGAAAAG GTGAGTCGTG GCGCTCCTTT ACTGAATAAG
GATAAACTCA ACGAGCTGAC GGCTGCAAAC TGGAATTGTA ATATAGATAG CATACGCCGG
GACCTGGGTT ACCAACCGCG CTATAATCTT GAAAAAGGTA TGCAGGAAAC CCTGGACTGG
TACTCGGCCA ATAAGTGGTT TTAG
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| Protein sequence | MKPRVLITGA SGFVGYHLVE AALDAGMEVY AAVRASSNVS HLNHLQVNYV YPDFSRKEAL
IEMIKEHRFD YIIHGAGITK ARSLDEYNKV NAGYTQNLAQ AVSESGIPLK KFLFISSLAA
VGPIAYDASW PVPDVITPSP VTSYGKSKLL AEEFLGAISN VPWVILRPTA VYGPRERDLF
VLFKTFRRGL EPYMGRGAQW LSFVYVKDLA DAAILALKAP VSGVAYNISD GNSYDRYALA
AIIKQHLKLR TLRIHLPLPV IKIVAAISEK VSRGAPLLNK DKLNELTAAN WNCNIDSIRR
DLGYQPRYNL EKGMQETLDW YSANKWF
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