Gene Cpin_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2380 
Symbol 
ID8358535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2925902 
End bp2929468 
Gene Length3567 bp 
Protein Length1188 aa 
Translation table11 
GC content49% 
IMG OID644964566 
Productmolybdopterin oxidoreductase 
Protein accessionYP_003122072 
Protein GI256421419 
COG category[R] General function prediction only 
COG ID[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.291899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGCA ATCATCAACA TAATAAACTT CCTGCGGGCA GCTACCGTAG CACCTGCTGT 
TATTGCGGCG TAGGTTGCGG TATCGTTGTC AACAGGGACA GGCAGGGAAA AATCACAGTA
GAAGGAGATA AAGATCATCC GGTTAACAAA GGTATGCTTT GTTCCAAAGG CATGAATCTT
CATTACACCG TGATGGACAC ATCAGACAGG CTTTATTACC CGGAAATGCG TTATCACCGG
CAAATGCCGA GACAGCGCGT TTCCTGGGAC CAGGCGCTCG AACGCACTGC TGCCGTATTT
AAACAGATGA TTGAACAATA TGGTCCTGAT TCAGTTGCTT TCTATGCATC CGGACAATGC
CTCACAGAAG AATATTATGT TGTCAATAAA CTGATCAAGG GATTCATTGG CAGTAATAAT
ATCGATACAA ACTCCAGGCT CTGTATGAGC AGTGCAGTAG CCGCCTATAA ATTATCGCTC
GGCGAAGACA GCGTACCTGG TTGCTATGAT GATATCGAAC AGACGGATTG CATCTTCGTA
GCAGGCGCTA ATCCTGCCTG GTGTCATCCG ATCTTATGGC GCAGGATCGA AGCTGCGAAA
GAAAAGAATC CGCACATGAA GATCATCGTC AGCGATCCCC GCGTTACACA AAGTTGCGCC
ATCGCTGATA TACACCTGCA ACTCATGCCG GGTACCGATA TCGTATTACA TCATGCTATC
GGCCGCCTGT TGATAGAAGC AGGTCATATC GATCACGATT TCATTCAACA ACATACAGAA
GGTTTCTCTA AATACCGGGA CACCGTCATG GAGCGCAGCA TCAGCAGCGC AGCTGCCATT
TGCGGTATTA CAGAAGACCT GATCTATGAA GCCGCAGCGC TGCTGGGCAA TGTACGCAGT
TTCATGACCA TGTGGACCAT GGGACTGAAC CAGAGCGCTG TAGGCGTTAA TAAGAACCTG
AGCCTGATCA ACCTCAATCT GATCACCGGT AAAATCGGTA AACCCGGCTG TGGCCCCTTC
TCTCTTACCG GACAACCCAA TGCCATGGGC GGTAGAGAAG TAGGCGGATT ATCCAACATG
CTGCCGGCAC ACCGTGTACT GGATAACCCT GCACACCGCA AGGAAGTAGA AGATTTCTGG
GGAGGTACGA AAATCTCCGA CAAACCGGGT CTTACCGCTA CCGAAATGTT TGAGGCACTG
AATGACGGAA GACTCAAAGC CATCTGGATC ATGTGTACCA ATCCGCTGGT AAGTCTGCCG
GACGCCCGTA TGGCCGAAGC TGCCCTGCAA AAGGCGAAGT TCGTCGTTGT ACAGGAGATC
TCGAATAAAC CGGAAACAGT CCGCTATGCA GATGTCGTAT TACCTGCTGC CGCATGGACC
GAAAAAGAAG GGACCATGAC TAATGCAGAA AGAAGGGTCA CTTATCTGCA GCGTGTCAAC
GAAGCGCCGG GAGAAGCCTT ACCGGATGCT GAGATCATCT GCCGCTTCGC ACAAAAAATG
GGCTTTAAAG GTTTTGATTA TACAGGTCCT GCTGACATTT ATGCGGAGCA CAGCCGCCTG
ACAGCCGGCA CCAATATCGA TGTCAGCGGA GTAGATTATA AAGTGCTGAA AGATAAACGC
TCCCTGCAAT GGCCTTATCC TGCCGGCACG ACCGGTCCGG GTACACCCAG ACTCTTTACG
GATCATCATT TCTATACATC ATCCACCAAA GCGATCATAC ATTCTTTCCC GGATGATAAC
CGGTCAGCAC CACCACATCC ACAGTTTCCG CTTATCCTTA CTACAGGACG TATAAGGGAT
CAATGGCACA CTATGAGCAA AACAGGTAAG GTGAGCAAGC TGAAACAGCA TATTCCTGCT
CCCCTGCTGG AAATACATCC GGAAGATGCC AGAGAGCGCC ATATTAAAGA AGCAGATATC
GTAGAGATAT TCAGTGAAAA CGGCACAGTA CGTGTGAAAG CACAACTGAG CACTTCCATT
AAAAAAGGAG TGGTATTCCT CCCGATGCAC TGGGGCAAGA TACTGGACAA TGACCTTAAC
AGGGCAAACA ACCTTACCCA CAGGCTGGTG GATAAGATAT CCAAACAACC GGATCTGAAA
TATACGGCGG TACAGGTACA ACTCTACCGC AAACCCCAGC AACGTATTAT CATCATTGGC
GCAGGCGCAG GCGCCTGTGG CTTTGTAAAA TCATACAGAG AACTGAATAC GACTGATACC
ATTACCGTAT TCAGCAAAGA AGATCAGCCC TTCTATAACA GGGTGATGCT ACCTGACTAT
ATCAGCGGCA CCCAGCAATG GCAGCAGCTG GTGAAGATGA CAGACGATGA AGAATCTATG
CTGGACATCA TATTACACCG GGGCGTCAGT ATTGAAAAGA TAGACAGGGA ACAAAAAACA
GTGACCGACA GTAAAGGCCG CGTACACGAA TATGATGTAC TCATTCTGGG CATGGGTAGC
CGTGCGGCCA CACTGAAAGA CACACCCGCG CTGCCAGGCA TTTTCACCAT GCGTAACCGC
AGGGATGCAG ATGCCTTTGT GCAGCACATA GACCCGTCAG CAGGAAAAGT AATGATTGTA
GGCGGCGGAC TGCTGGGTAT TGAATTAGCT GCTTCACTAA GAGAAATGGA TATAGAAGTC
GCTGTATTAC AGCGTACCTC TAAACTGATG GACCGACAGC TGGATGCCCT GGGCAGCCAG
CTGTTGTATG AAGAACTGAC GGATCGCGGC ATAGAAATCT TATACAATGA TGAAATAGAA
CGCTTTACTG GTCTGAATAA ACTGGATGGT ATCCGGCTGA AAAGCGGCCG GCAGGTAACT
TGTCAGGCAG TAGTCATGTC TATCGGTACC GTTCCGAACA TAGAACTGGC CAAGGCATCT
TCTTTATTGT GCAAGCGTGG TGTGATCGTC AATGAATACC TCATGACCAG CGATCCGGCT
ATCTATGCCA TCGGAGAAAT CGCTGAATTC AATGGTACGC TCTTTGGCAT CACAGCAGCA
GCAGAACAAC AGGCTGCAGT AGTGGCCCGT CATATGGCGG GAGATCTTAC CGGTTATTAC
CAGGGTTCCC TGTTTATGAA CATCCTCAAG ATGCATGGCA CAGACCTTTG TTCACTGGGA
ATGATAGAAA CACCTGCGGA CCCGGCTTAC GAAGAAGTCG TGTTCATTGA TAAATCCAAA
CGTTATTATA AGAAGTGCGT CATCCACAAT GACAGACTGG TAGGCGCTAT CCTGATTGGT
GACAAATCAG AGTTCCTGGA GTTCAGGGAT CTGATCGCCA ACAAAATAGA GCTCTCTGAG
AAACGACTGG AACTATTACG CTCAGGCAAG AAAGCCGCGC CGGTGCTCGG TAAGCTTGTT
TGCAGCTGCG GTAGTGTGGG AGAAGGTAAT ATCTGTGAGA AGATCAGAGA AGGTAGTCAT
ACACTGGAAG ACGTCTGTAA AGCATCCGGC GCCGGTATGG GTTGCGGTAG CTGCCGGCCG
GAGATCAAGG CGATCCTGGA GAAGGAAATG CCCCTCAAGA AGAAAGAAAG AGCCGCACTA
GCCGCACTTA TTGAAATTAA CAATTAG
 
Protein sequence
MTGNHQHNKL PAGSYRSTCC YCGVGCGIVV NRDRQGKITV EGDKDHPVNK GMLCSKGMNL 
HYTVMDTSDR LYYPEMRYHR QMPRQRVSWD QALERTAAVF KQMIEQYGPD SVAFYASGQC
LTEEYYVVNK LIKGFIGSNN IDTNSRLCMS SAVAAYKLSL GEDSVPGCYD DIEQTDCIFV
AGANPAWCHP ILWRRIEAAK EKNPHMKIIV SDPRVTQSCA IADIHLQLMP GTDIVLHHAI
GRLLIEAGHI DHDFIQQHTE GFSKYRDTVM ERSISSAAAI CGITEDLIYE AAALLGNVRS
FMTMWTMGLN QSAVGVNKNL SLINLNLITG KIGKPGCGPF SLTGQPNAMG GREVGGLSNM
LPAHRVLDNP AHRKEVEDFW GGTKISDKPG LTATEMFEAL NDGRLKAIWI MCTNPLVSLP
DARMAEAALQ KAKFVVVQEI SNKPETVRYA DVVLPAAAWT EKEGTMTNAE RRVTYLQRVN
EAPGEALPDA EIICRFAQKM GFKGFDYTGP ADIYAEHSRL TAGTNIDVSG VDYKVLKDKR
SLQWPYPAGT TGPGTPRLFT DHHFYTSSTK AIIHSFPDDN RSAPPHPQFP LILTTGRIRD
QWHTMSKTGK VSKLKQHIPA PLLEIHPEDA RERHIKEADI VEIFSENGTV RVKAQLSTSI
KKGVVFLPMH WGKILDNDLN RANNLTHRLV DKISKQPDLK YTAVQVQLYR KPQQRIIIIG
AGAGACGFVK SYRELNTTDT ITVFSKEDQP FYNRVMLPDY ISGTQQWQQL VKMTDDEESM
LDIILHRGVS IEKIDREQKT VTDSKGRVHE YDVLILGMGS RAATLKDTPA LPGIFTMRNR
RDADAFVQHI DPSAGKVMIV GGGLLGIELA ASLREMDIEV AVLQRTSKLM DRQLDALGSQ
LLYEELTDRG IEILYNDEIE RFTGLNKLDG IRLKSGRQVT CQAVVMSIGT VPNIELAKAS
SLLCKRGVIV NEYLMTSDPA IYAIGEIAEF NGTLFGITAA AEQQAAVVAR HMAGDLTGYY
QGSLFMNILK MHGTDLCSLG MIETPADPAY EEVVFIDKSK RYYKKCVIHN DRLVGAILIG
DKSEFLEFRD LIANKIELSE KRLELLRSGK KAAPVLGKLV CSCGSVGEGN ICEKIREGSH
TLEDVCKASG AGMGCGSCRP EIKAILEKEM PLKKKERAAL AALIEINN