Gene Cpin_2376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2376 
Symbol 
ID8358531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2920393 
End bp2921778 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content43% 
IMG OID644964562 
ProductUndecaprenyl-phosphate glucose phosphotransferase 
Protein accessionYP_003122068 
Protein GI256421415 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGACC GTTATCTCAA AATATGTAGC ATCCAGATAC TCGTGCTGGA CTTCATATGC 
CTCAATGCCT TCTTTTTCTT CACGCTTTCC GGGATGCAGC AATATGGTAT ACCCGTAAGC
GTTAATAAAG ACACATTCCT GCTCGCTACG AACTTTTCCT GGATCGTGGC GCTGTATACT
ACCGGTCTTT ATTTTATGAG TACACATATG TCTGTGGAGC GGATTACCAA GAAGCTGCTG
CAGAGTATCA TGTTATACCT CCTGCTGATG CTGGTGTTTG TATTCCTTAC AAAAGAAGCA
TTCAACAGAA TCTTTATTTT GTCTTACTGT ACGCTGTTTG TTATTCTCGT ATTATTTGAC
AGGATATTTT TCTATATGTT GACGAACTAC ATCATTCACC GCAAGGAGAT TGAGCGCAGA
GTAGTAATTG TCGGATATAA CGACCTGTCT AAACAGCTGG TGGACAACCT GACCGGACGC
AAGAGCAATC TGCGTTTTGA AGGGTATTTC GAAGACTATC ACAATGTACA TGAGTTATCC
CTACATCCGG TGATCGGTAA CCTGCGGGAT TGTATTCCGT ATGCACAGTC AAACGGGATC
AAGGAGATTT ATTCAACATT ATCACCAGAG CAGTTCCCGT ATCTGTATAC ACTGGCGCAT
GAAGCAGAGC GGCATTTTAT CCGTTTTCGT TTTGTGCCTG ACTTCAGGAT GTTTGTGAAC
AGGCAGATTT ATGTGGATTA CCTGGATAAT ATTCCTATCA TCTCTCTGAG AGCAGAACCA
CTGGATGATA TTGCCAATCG CTTGAGGAAA CGTATTTTTG ATCTCGTGTT CAGTGGCGCA
GTGATGTTAT TTATCCTGAG CTGGCTCATT CCGCTGCTGG CCCTGTTAGT AAAACTTGAA
TCGAGAGGAC CTGTATTCTT TATACAGCAT CGTACCGGTC GTAACAACCA GACATTCCGT
TGTTTGAAAT TCAGGAGTAT GTATGTGAAC AATGAAGCAA ACTCCAAGCA GGCAACGAGA
AACGACCGTC GTTTTACGAG AGTGGGTCGT ATACTGCGTA AGACGAACCT GGATGAAATG
CCTCAGTTCC TGAATGTATT TCTGGGTGAT ATGTCTATCG TAGGACCACG TCCGCATATG
TTGAAGCATA CAGAAGAGTA TTCTGCTATT ATCCAGAAAT ACATGATCCG TCACTTCCTG
AAACCTGGTA TTACAGGATG GGCACAGGTG AATGGTTATC GTGGAGAGGT GACAGATGAA
TTACATCTGC GCAAACGTAT CGAACATGAT ATCTGGTATA TGGAAAACTG GTCTGTATGG
CTGGACATTC GTATCATATT CTTAACCGTA TTCAACACTG TAAAAGGAGA TAAGAACGCA
TTTTAA
 
Protein sequence
MLDRYLKICS IQILVLDFIC LNAFFFFTLS GMQQYGIPVS VNKDTFLLAT NFSWIVALYT 
TGLYFMSTHM SVERITKKLL QSIMLYLLLM LVFVFLTKEA FNRIFILSYC TLFVILVLFD
RIFFYMLTNY IIHRKEIERR VVIVGYNDLS KQLVDNLTGR KSNLRFEGYF EDYHNVHELS
LHPVIGNLRD CIPYAQSNGI KEIYSTLSPE QFPYLYTLAH EAERHFIRFR FVPDFRMFVN
RQIYVDYLDN IPIISLRAEP LDDIANRLRK RIFDLVFSGA VMLFILSWLI PLLALLVKLE
SRGPVFFIQH RTGRNNQTFR CLKFRSMYVN NEANSKQATR NDRRFTRVGR ILRKTNLDEM
PQFLNVFLGD MSIVGPRPHM LKHTEEYSAI IQKYMIRHFL KPGITGWAQV NGYRGEVTDE
LHLRKRIEHD IWYMENWSVW LDIRIIFLTV FNTVKGDKNA F