Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2373 |
Symbol | |
ID | 8358528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2918046 |
End bp | 2918516 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644964559 |
Product | VanZ family protein |
Protein accession | YP_003122065 |
Protein GI | 256421412 |
COG category | [V] Defense mechanisms |
COG ID | [COG4767] Glycopeptide antibiotics resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.521595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATAA GATTAAAGAA GAGCACTGTT ATCATCCTGT TAGTCGTGTA TATGCTGGCG GTGATATACG TTGTGTTCCT CGATCCAACG AGAGTAGCGG GCGAGCGGTA TGCGGAGCCA AGATGGATGC CACTGAAGAG TACCTATGAT TTTATTATAG AAGCCGGTAA GTCAGTCCGG TATATCCGTT ACTGGGCGTT TTTTGCGCTG AACCTTATCG GGAACGTTAT CATGTTTATG CCACTGGGTT TTCTGCTGGA AGCATTATCA GCAGGAGCTG CCAACAAAAT AAGAGTAATC ACGATCGCAT TCTTTTTCAG TCTGAGTATT GAATTACTGC AACTGGTGCT GATGATCGGT GTGTATGACG CCGATGACAT TGTACTGAAC ACATTGGGCG CCTGGCTCGG CTTGTGTCTA TATCGCAAAA TGGTAAAGAA GAATGTGGTC CTTGTTCATA ATAATTCCTG A
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Protein sequence | MSIRLKKSTV IILLVVYMLA VIYVVFLDPT RVAGERYAEP RWMPLKSTYD FIIEAGKSVR YIRYWAFFAL NLIGNVIMFM PLGFLLEALS AGAANKIRVI TIAFFFSLSI ELLQLVLMIG VYDADDIVLN TLGAWLGLCL YRKMVKKNVV LVHNNS
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