Gene Cpin_2373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2373 
Symbol 
ID8358528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2918046 
End bp2918516 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content44% 
IMG OID644964559 
ProductVanZ family protein 
Protein accessionYP_003122065 
Protein GI256421412 
COG category[V] Defense mechanisms 
COG ID[COG4767] Glycopeptide antibiotics resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.521595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATAA GATTAAAGAA GAGCACTGTT ATCATCCTGT TAGTCGTGTA TATGCTGGCG 
GTGATATACG TTGTGTTCCT CGATCCAACG AGAGTAGCGG GCGAGCGGTA TGCGGAGCCA
AGATGGATGC CACTGAAGAG TACCTATGAT TTTATTATAG AAGCCGGTAA GTCAGTCCGG
TATATCCGTT ACTGGGCGTT TTTTGCGCTG AACCTTATCG GGAACGTTAT CATGTTTATG
CCACTGGGTT TTCTGCTGGA AGCATTATCA GCAGGAGCTG CCAACAAAAT AAGAGTAATC
ACGATCGCAT TCTTTTTCAG TCTGAGTATT GAATTACTGC AACTGGTGCT GATGATCGGT
GTGTATGACG CCGATGACAT TGTACTGAAC ACATTGGGCG CCTGGCTCGG CTTGTGTCTA
TATCGCAAAA TGGTAAAGAA GAATGTGGTC CTTGTTCATA ATAATTCCTG A
 
Protein sequence
MSIRLKKSTV IILLVVYMLA VIYVVFLDPT RVAGERYAEP RWMPLKSTYD FIIEAGKSVR 
YIRYWAFFAL NLIGNVIMFM PLGFLLEALS AGAANKIRVI TIAFFFSLSI ELLQLVLMIG
VYDADDIVLN TLGAWLGLCL YRKMVKKNVV LVHNNS