Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2363 |
Symbol | |
ID | 8358518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2905691 |
End bp | 2907037 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644964549 |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_003122055 |
Protein GI | 256421402 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000065452 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCAA TCGTAATTGG TACAGGATAC GTAGGGTTGG TTACCGGCGC CTGCCTCGCA GAAGTAGGTA CGCAGGTAGT ATGTGTGGAT GTTAACGCCG AGAAGATCAA TAACCTCAAA AACGGCATTT TACCTATTTA TGAACCGGGT CTCGAAGAGA TCGTTACCCG TAACTATAAC AACGGCCGTC TGTCATTCAG CACTAGTCTT GCTGAAGTGA TCCCTGGTGC GGATATCGCG TTTATCGCGG TAGGAACGCC TCCGGGTGAA GATGGTAGCG CTGATCTGCA GTATGTACTG CAGGTGGCAA AAGAAATCGG TACACATATG ACCGATTACC TGGTAGTGGT GACTAAGAGC ACTGTACCTG TTGGTACTGC TGTGAAAGTG AACAGGGAAA TCAAACAGGC AATGATGGAC AGAGAAGCAC TGATCGATTA TGATGTTGCT TCTAATCCTG AATTCCTGAA AGAAGGTGCG GCTGTTCAGG ACTTCCTGAA ACCTGACCGT ATCGTGGTAG GTGTAAACAC CGACAGGGCG AAAGAAGTAC TGGAGCGTCT GTATCATCCA TTCCTGCTGA ATGGCCGTCC GATCATCTTT ATGGACATCG CATCCGCAGA AATGACCAAA TATGCAGCAA ACGCCATGCT GGCCACTAAG ATCTCTTTCA TCAATGATAT CGCAAACCTC TGCGAACTGG TAGGCGCTGA TGTGAATAAA GTGCGTAAAG GTATCGGTAG CGATGCGAGA ATCGGTAACA GCTTTATCTA TCCGGGTATT GGTTACGGTG GTTCCTGCTT CCCTAAAGAT GTGAAAGCAC TGGTACGTAC CGGTATGGAT TATGGTCACG GACTGCGTAT CCTGGAAGCG GTAGAAGCAG TAAACAATGA TCAGAAACGT GTATTGTTCA ATAAGATCAA CAAACATTTT GATGGTCTGC TGAAAGATAA AACATTCGCA GTATGGGGGC TCTCTTTCAA ACCTGGTACT GATGATATGC GCGAAGCTTC CAGTCTGGTA CTGATCGAAG CATTGCTCGA AGCAGGTGCA AATGTGAGAG TATTTGATCC GGTAGCGGCG CATGAAGCGA AGAAGACACT GAATGACAGC GTAACCTGGG CAACTGACCT GTATGACGCT GCTGACGGTG CTGACGCAGT ATTGCTGGTG ACAGAATGGA ACGAATTCCG CCTTCCTGAC TGGAACCGCA TTAAACAATT AGTAAAAACC CCTGTTGTAT TTGACGGCAG GAACATTTAT GATAACACAT ATCTTGAGAA AAGCGGTTTT ATCTGTTACA GCATTGGTAT CTCCCAGCCG GCAGTGAGCG TACTCTCCAG AAGTTAA
|
Protein sequence | MKAIVIGTGY VGLVTGACLA EVGTQVVCVD VNAEKINNLK NGILPIYEPG LEEIVTRNYN NGRLSFSTSL AEVIPGADIA FIAVGTPPGE DGSADLQYVL QVAKEIGTHM TDYLVVVTKS TVPVGTAVKV NREIKQAMMD REALIDYDVA SNPEFLKEGA AVQDFLKPDR IVVGVNTDRA KEVLERLYHP FLLNGRPIIF MDIASAEMTK YAANAMLATK ISFINDIANL CELVGADVNK VRKGIGSDAR IGNSFIYPGI GYGGSCFPKD VKALVRTGMD YGHGLRILEA VEAVNNDQKR VLFNKINKHF DGLLKDKTFA VWGLSFKPGT DDMREASSLV LIEALLEAGA NVRVFDPVAA HEAKKTLNDS VTWATDLYDA ADGADAVLLV TEWNEFRLPD WNRIKQLVKT PVVFDGRNIY DNTYLEKSGF ICYSIGISQP AVSVLSRS
|
| |