| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2340 |
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| Symbol | |
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| ID | 8358495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2883779 |
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| End bp | 2884552 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964526 |
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| Product | Exonuclease RNase T and DNA polymerase III |
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| Protein accession | YP_003122032 |
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| Protein GI | 256421379 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.510368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.684331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCTCTT TGCAACTTAA AAGGCCGCTG GCCGTAATTG ATCTGGAGAC GACCGGTACC
AACGTGGCTA CGGACCGTAT TATTGAAATT GCTATTATCA AAGTGTTCCC TGACAAGTCT
GTTCAGACAA AAGTCAAAAG GATACACCCA GGCATGCCTA TTCCTCCGGC CTCCACTGCC
ATCCATGGTA TCAGTGACGA GGATATTAAG GATTGTCCGA CGTTCAAACA ATGCGCAAAT
GAATTGCGTC AGTACATGGA AAACTGTGAT CTGGCCGGAT ATAATTCCAA CCGTTTCGAT
ATCCCCCTGC TGGTAGAAGA ATTCCTCCGT GCAGGTCTCG ATTTTGATAC AAAAGACCGT
AGATTCATCG ACGTACAGAA GATATTCCAC CTGATGGAAA AACGTACGCT GAGCGCTGCT
TACAAGTTCT ATTGCGATAA AGACCTTACA AATGCGCATA GCGCAGAAGC AGATGCCCTC
GCTACCTATG AGATCCTGGA AGCACAGTTG AGCCGTTACG AGCAGCTGCA GGCTGAAGTA
GCGCCACTGG CCGAATTCAC CAAAGAAGAC GATTATGTTG ACTTTGCCAG AAGAATGGTT
GTACAGAATG GAGTGGAAAT GTTCAATTTT GGTAAATATA AAGGCCGTGC AGTACGGGAA
GTACTCAAAA TTGAGCCACA GTACTATGAT TGGATGATGA AAGCTGATTT TCCGCTCAAT
ACCAAGCAGA AACTCACAGA GATCTACCAT AGTATGATGT TAAAAAAGAT TTAA
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| Protein sequence | MPSLQLKRPL AVIDLETTGT NVATDRIIEI AIIKVFPDKS VQTKVKRIHP GMPIPPASTA
IHGISDEDIK DCPTFKQCAN ELRQYMENCD LAGYNSNRFD IPLLVEEFLR AGLDFDTKDR
RFIDVQKIFH LMEKRTLSAA YKFYCDKDLT NAHSAEADAL ATYEILEAQL SRYEQLQAEV
APLAEFTKED DYVDFARRMV VQNGVEMFNF GKYKGRAVRE VLKIEPQYYD WMMKADFPLN
TKQKLTEIYH SMMLKKI
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