Gene Cpin_2332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2332 
Symbol 
ID8358487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2874793 
End bp2875119 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content48% 
IMG OID644964518 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_003122024 
Protein GI256421371 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.200874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTT ACGTAGCCAA CCTGCACTAC AGGTTGAACG ATGCAGACCT TCACCAGATA 
TTCAGCGAAT TTGGCGAGGT TACTTCTGCT AAAATTATCA AGGACCACGA GACTGGCCGT
TCACGCGGTT TCGGATTCGT GGAAATGCCC AACCAGGAAG AAGGTAGCAA GGCTATGGAT
AGTTTGAACG GTACTGAAAT CGAAGGCAAA CAATTGATGG TAAACGAAGC AAGACCTAAA
CAACCGAATA ATAACTCAAG AGGTGGTGGA TTTAATCGCG GTGGAAGCGG TGGATACGGC
GGCGGCGGCG GCCGTGGTCG TTATTAA
 
Protein sequence
MNIYVANLHY RLNDADLHQI FSEFGEVTSA KIIKDHETGR SRGFGFVEMP NQEEGSKAMD 
SLNGTEIEGK QLMVNEARPK QPNNNSRGGG FNRGGSGGYG GGGGRGRY