| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2328 |
|---|
| Symbol | |
|---|
| ID | 8358483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2870564 |
|---|
| End bp | 2870977 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644964514 |
|---|
| Product | DoxX family protein |
|---|
| Protein accession | YP_003122020 |
|---|
| Protein GI | 256421367 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2259] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.380358 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAC TATTTACTTC GCGTGTGAAC GCCGGCGCCG TTAACTTTGC CATGCTGATA
TTGCGGGTGG TATCCGGAGG GATGATGTTC ACACACGGAT GGGCAAAACT GAACTCTTTT
TCAGCTAAAA AGGACGGTTT TCCCGACCCA TTGCACGTCG GACATGCAGT ATCGATGTCA
CTGACTGTCT TTGCAGAAGC GCTTTGCGCA GCATTGATCG TGGTAGGATT GCTGACACGC
CTGGCGGCTG TACCGCTGGT GATTTGTATG GGAGTGGTGA TATTTATGGT AAAGAAAGGA
GCGCCACTGA ACGAAAATGA GATGGCTATC CTGTTCCTGG CAGCGTTTAT CGCTATATTA
TTTGCCGGTC CTGGTAAGTT CAGCCTGGAT CATCTATTTG GAAAAGGAAA ATAA
|
|---|
| Protein sequence | MSKLFTSRVN AGAVNFAMLI LRVVSGGMMF THGWAKLNSF SAKKDGFPDP LHVGHAVSMS
LTVFAEALCA ALIVVGLLTR LAAVPLVICM GVVIFMVKKG APLNENEMAI LFLAAFIAIL
FAGPGKFSLD HLFGKGK
|
|---|
| |