Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2323 |
Symbol | |
ID | 8358478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2860166 |
End bp | 2862223 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644964509 |
Product | Prolyl oligopeptidase |
Protein accession | YP_003122015 |
Protein GI | 256421362 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1505] Serine proteases of the peptidase family S9A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAC AGTCAGGAAT TACTTATCCG AAAACAAATA AAACAGACGT TACAGACAAT TACCATGGCA CCTCCATTGC TGATCCGTAC CGTTGGCTGG AAGATGATAA TAGCCCTGAG ACCAAAGAAT GGGTAAAGGC TCAGAACGCT GTCACTTCCG AATACCTTAA TAAGATACCT TTCCATGGTG CAGTCCGTAA ACGACTGGAA GAACTCTGGA ACTACCCTAA GATAGGTGCA CCCTTCAAAA AAGGAGATTA TTACTACTTC TTTAAAAATG ATGGTCTGCA GAACCAGTCC GTGCTCTACC GTCAGAAAAC CCTGAACGGT ACGCCGGAAG TCTTCATTGA CCCGAATAAG TTCTCCGCCA GCGGAACAGT CGCGCTGGGT AGCATTTCCT TCTCCAAAGA TGCGAAATAT ATCGCCTATC AGATCGCGAA AGCCGGTTCT GACTGGCAAC AGGCGTTTGT TATGGATGTG GAAAGCAAGC AACTGCTGAA AGATTCTATC GACTGGATCA AGTTCAGTGG TATCTCCTGG AAAAAGGATG GTTTCTACTA CAGCCGCTAC GATAAGCCGA CCGAAGAGAA CAAACTGTCT AAAAAGAACG AATTCCATAA GGTATATTAT CATAAACTGG GTACCTCTCA GGAGCAGGAT GTACTGATCT TTGAAGATAA AGAACACCCG CTGCGCAATG CCGGCGCACA TGTCACCGAA GATGAACGTT TCCTCATTCT GAGCCAGAGC GAAGGAACTT CCGGTAACCA GGTACTGTAC TGGGACTTAC AGGATCCTTC CCAGAAAGGA TTTAATCTGC TGGTGAAAGG GTTTGAGTTC GAACCCAGCA TCATAGACAG CCATGGGGAT AAACTAATCC TGCTGACCAA CGAAGGAGCG CCCAATTATA AAGTAGAGCT GATCGATCCT AAAAACCCCT CCAGCCGTCA GCTGCTCATT CCGGAGCAGA AAGAAGTGCT GCAGGGAGTA GGTACTGCAG GTAAGCGGCT TTTCGCCAGC TACCTGAAAG ATGCGGCGTC CCGTGTAGCA CAATATACAT ATGATGGTAA ACTGGACTGG CAGATTGAAT TACCAGGTAT CGGTACCGCC AGCGGTTTTG GTGGAGAAGA CGGAGATAAG GAATTTTTCT ATTCATTCAC TTCTTTCGTG AACCCGGTAA CGATCTATAA ATATGATATT GCCAGTGGTA AGTCAGCCCT GTATGCTAAA ACGGAAGTGA AATTCCGTCA GGAGGACTAT GAAACCAAAC AGGTGTTCTT CAATAGTAAA GATGGTACCA AGGTGCCTGT GTTCCTGTCT TATAAAAAAG GACTTAAAAA AGATGGCAAA AATCCGGTAC TGCTCTATGG CTATGGTGGC TTCAATATCC CGATGACCCC TGGATTCAGT GTTTCCAACC TGTTTTTCAT GGAGCAGGGA GGCATCTATG CGGTTGTTTG TCTGAGAGGT GGGAGTGAAT ATGGAGAAGC CTGGCACAAG GGCGGTATGC TGGAAAAGAA GCAGAACGTA TTTGACGACT TTATCGGTGC CGCCGAATTC CTGGTAAAAG AGAAATATAC CAGTCCTTCC AAACTGGCGA TCCGTGGTGG CTCTAATGGT GGCTTGCTGA TAGGCGCCTG TATGACCCAG CGCCCGGATC TGTTCAAAGT GGCCCTGCCG GCAGTAGGAG TGATGGATAT GCTTCGTTTC CAGAACTTCA CGATTGGATG GGCATGGGTA ACAGAATATG GTACCAGTGC TAAACCTGAA CAGTTCAACT ATCTTATTAA ATACTCTCCG TTGCATAACC TGAAAGCAGG TACGCAATAT CCGGCAACCC TGGTTACTAC TGCGGATCAT GATGACCGTG TAGTACCGGC ACACTCCTTT AAGTTTGCCG CAACCTTACA GGCTGCCAAT GCTGGTCCTA ACCCGACGCT TATACGTATA GATACCCAGG CTGGTCACGG TGCCGGTAAA CCTACGTCCA AGCTGATCGA AGAAGCCGCA GACGTCTGGT CATTTACGAT GTATAATCTG GGTATGAGCT TTAAATAA
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Protein sequence | MAQQSGITYP KTNKTDVTDN YHGTSIADPY RWLEDDNSPE TKEWVKAQNA VTSEYLNKIP FHGAVRKRLE ELWNYPKIGA PFKKGDYYYF FKNDGLQNQS VLYRQKTLNG TPEVFIDPNK FSASGTVALG SISFSKDAKY IAYQIAKAGS DWQQAFVMDV ESKQLLKDSI DWIKFSGISW KKDGFYYSRY DKPTEENKLS KKNEFHKVYY HKLGTSQEQD VLIFEDKEHP LRNAGAHVTE DERFLILSQS EGTSGNQVLY WDLQDPSQKG FNLLVKGFEF EPSIIDSHGD KLILLTNEGA PNYKVELIDP KNPSSRQLLI PEQKEVLQGV GTAGKRLFAS YLKDAASRVA QYTYDGKLDW QIELPGIGTA SGFGGEDGDK EFFYSFTSFV NPVTIYKYDI ASGKSALYAK TEVKFRQEDY ETKQVFFNSK DGTKVPVFLS YKKGLKKDGK NPVLLYGYGG FNIPMTPGFS VSNLFFMEQG GIYAVVCLRG GSEYGEAWHK GGMLEKKQNV FDDFIGAAEF LVKEKYTSPS KLAIRGGSNG GLLIGACMTQ RPDLFKVALP AVGVMDMLRF QNFTIGWAWV TEYGTSAKPE QFNYLIKYSP LHNLKAGTQY PATLVTTADH DDRVVPAHSF KFAATLQAAN AGPNPTLIRI DTQAGHGAGK PTSKLIEEAA DVWSFTMYNL GMSFK
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