Gene Cpin_2323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2323 
Symbol 
ID8358478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2860166 
End bp2862223 
Gene Length2058 bp 
Protein Length685 aa 
Translation table11 
GC content47% 
IMG OID644964509 
ProductProlyl oligopeptidase 
Protein accessionYP_003122015 
Protein GI256421362 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1505] Serine proteases of the peptidase family S9A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAC AGTCAGGAAT TACTTATCCG AAAACAAATA AAACAGACGT TACAGACAAT 
TACCATGGCA CCTCCATTGC TGATCCGTAC CGTTGGCTGG AAGATGATAA TAGCCCTGAG
ACCAAAGAAT GGGTAAAGGC TCAGAACGCT GTCACTTCCG AATACCTTAA TAAGATACCT
TTCCATGGTG CAGTCCGTAA ACGACTGGAA GAACTCTGGA ACTACCCTAA GATAGGTGCA
CCCTTCAAAA AAGGAGATTA TTACTACTTC TTTAAAAATG ATGGTCTGCA GAACCAGTCC
GTGCTCTACC GTCAGAAAAC CCTGAACGGT ACGCCGGAAG TCTTCATTGA CCCGAATAAG
TTCTCCGCCA GCGGAACAGT CGCGCTGGGT AGCATTTCCT TCTCCAAAGA TGCGAAATAT
ATCGCCTATC AGATCGCGAA AGCCGGTTCT GACTGGCAAC AGGCGTTTGT TATGGATGTG
GAAAGCAAGC AACTGCTGAA AGATTCTATC GACTGGATCA AGTTCAGTGG TATCTCCTGG
AAAAAGGATG GTTTCTACTA CAGCCGCTAC GATAAGCCGA CCGAAGAGAA CAAACTGTCT
AAAAAGAACG AATTCCATAA GGTATATTAT CATAAACTGG GTACCTCTCA GGAGCAGGAT
GTACTGATCT TTGAAGATAA AGAACACCCG CTGCGCAATG CCGGCGCACA TGTCACCGAA
GATGAACGTT TCCTCATTCT GAGCCAGAGC GAAGGAACTT CCGGTAACCA GGTACTGTAC
TGGGACTTAC AGGATCCTTC CCAGAAAGGA TTTAATCTGC TGGTGAAAGG GTTTGAGTTC
GAACCCAGCA TCATAGACAG CCATGGGGAT AAACTAATCC TGCTGACCAA CGAAGGAGCG
CCCAATTATA AAGTAGAGCT GATCGATCCT AAAAACCCCT CCAGCCGTCA GCTGCTCATT
CCGGAGCAGA AAGAAGTGCT GCAGGGAGTA GGTACTGCAG GTAAGCGGCT TTTCGCCAGC
TACCTGAAAG ATGCGGCGTC CCGTGTAGCA CAATATACAT ATGATGGTAA ACTGGACTGG
CAGATTGAAT TACCAGGTAT CGGTACCGCC AGCGGTTTTG GTGGAGAAGA CGGAGATAAG
GAATTTTTCT ATTCATTCAC TTCTTTCGTG AACCCGGTAA CGATCTATAA ATATGATATT
GCCAGTGGTA AGTCAGCCCT GTATGCTAAA ACGGAAGTGA AATTCCGTCA GGAGGACTAT
GAAACCAAAC AGGTGTTCTT CAATAGTAAA GATGGTACCA AGGTGCCTGT GTTCCTGTCT
TATAAAAAAG GACTTAAAAA AGATGGCAAA AATCCGGTAC TGCTCTATGG CTATGGTGGC
TTCAATATCC CGATGACCCC TGGATTCAGT GTTTCCAACC TGTTTTTCAT GGAGCAGGGA
GGCATCTATG CGGTTGTTTG TCTGAGAGGT GGGAGTGAAT ATGGAGAAGC CTGGCACAAG
GGCGGTATGC TGGAAAAGAA GCAGAACGTA TTTGACGACT TTATCGGTGC CGCCGAATTC
CTGGTAAAAG AGAAATATAC CAGTCCTTCC AAACTGGCGA TCCGTGGTGG CTCTAATGGT
GGCTTGCTGA TAGGCGCCTG TATGACCCAG CGCCCGGATC TGTTCAAAGT GGCCCTGCCG
GCAGTAGGAG TGATGGATAT GCTTCGTTTC CAGAACTTCA CGATTGGATG GGCATGGGTA
ACAGAATATG GTACCAGTGC TAAACCTGAA CAGTTCAACT ATCTTATTAA ATACTCTCCG
TTGCATAACC TGAAAGCAGG TACGCAATAT CCGGCAACCC TGGTTACTAC TGCGGATCAT
GATGACCGTG TAGTACCGGC ACACTCCTTT AAGTTTGCCG CAACCTTACA GGCTGCCAAT
GCTGGTCCTA ACCCGACGCT TATACGTATA GATACCCAGG CTGGTCACGG TGCCGGTAAA
CCTACGTCCA AGCTGATCGA AGAAGCCGCA GACGTCTGGT CATTTACGAT GTATAATCTG
GGTATGAGCT TTAAATAA
 
Protein sequence
MAQQSGITYP KTNKTDVTDN YHGTSIADPY RWLEDDNSPE TKEWVKAQNA VTSEYLNKIP 
FHGAVRKRLE ELWNYPKIGA PFKKGDYYYF FKNDGLQNQS VLYRQKTLNG TPEVFIDPNK
FSASGTVALG SISFSKDAKY IAYQIAKAGS DWQQAFVMDV ESKQLLKDSI DWIKFSGISW
KKDGFYYSRY DKPTEENKLS KKNEFHKVYY HKLGTSQEQD VLIFEDKEHP LRNAGAHVTE
DERFLILSQS EGTSGNQVLY WDLQDPSQKG FNLLVKGFEF EPSIIDSHGD KLILLTNEGA
PNYKVELIDP KNPSSRQLLI PEQKEVLQGV GTAGKRLFAS YLKDAASRVA QYTYDGKLDW
QIELPGIGTA SGFGGEDGDK EFFYSFTSFV NPVTIYKYDI ASGKSALYAK TEVKFRQEDY
ETKQVFFNSK DGTKVPVFLS YKKGLKKDGK NPVLLYGYGG FNIPMTPGFS VSNLFFMEQG
GIYAVVCLRG GSEYGEAWHK GGMLEKKQNV FDDFIGAAEF LVKEKYTSPS KLAIRGGSNG
GLLIGACMTQ RPDLFKVALP AVGVMDMLRF QNFTIGWAWV TEYGTSAKPE QFNYLIKYSP
LHNLKAGTQY PATLVTTADH DDRVVPAHSF KFAATLQAAN AGPNPTLIRI DTQAGHGAGK
PTSKLIEEAA DVWSFTMYNL GMSFK