Gene Cpin_2315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2315 
Symbol 
ID8358470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2849075 
End bp2849521 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content49% 
IMG OID644964501 
Producthypothetical protein 
Protein accessionYP_003122007 
Protein GI256421354 
COG category[S] Function unknown 
COG ID[COG4270] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.20145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTT TATCCGGACT TTTAACAATA GGCTTATTAC TATTACTGAC AGGACATCTG 
TTCAGTATTA CCTGGTTACA GCAGCTGCAC AATGACGCTA TGATTGCTGC GGCCGTGATG
TTTGTAATGA TAGGGGTGAT GCACCTGGCG ACGCCCCGTA AACTGACCTA TATGATCGAA
GGTTGGTTGC CCTATGCATT GGAGCTGGTA CTGATCAGCG GCGTACTTGA AATCGTATTC
GGAATAGGGT TGCTGGTGCC GGCAGCGAGA ATATATGCGG CCTGGGGACT GATCCTCTTA
CTGATCATGA TGTTTCCGGC AAATATCTAT GTAGCGGTAA AACAGTTACC TGCTCCCGGC
GGATTACCCG CTAAGCCCTG GTATACCTGG AGTCGCCTGG CCTTTCAGCC GGTATATATA
GCGTGGATAT GGTGGTGTGT CAGGTAA
 
Protein sequence
MAFLSGLLTI GLLLLLTGHL FSITWLQQLH NDAMIAAAVM FVMIGVMHLA TPRKLTYMIE 
GWLPYALELV LISGVLEIVF GIGLLVPAAR IYAAWGLILL LIMMFPANIY VAVKQLPAPG
GLPAKPWYTW SRLAFQPVYI AWIWWCVR