Gene Cpin_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2288 
Symbol 
ID8358443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2820256 
End bp2821491 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content46% 
IMG OID644964474 
Productacyltransferase 3 
Protein accessionYP_003121980 
Protein GI256421327 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCTA ACACGTCCTC ACCAAGATAC TTCTTCAGCC TGGATGCCAT AAGAGGCTTT 
GCTGCTCTTA TTGTAGTACT GTGCCACTGG CAATTTTATT TTTATACCGA TCAGACGCTG
CAAACCAAAC CGCTTGAAGA GCTTGGGTTG CCTTTATTTC CCTTCCTATC AATTTTTTAC
CACCACGCTT TCTTTGCGGT GGACCTCTTC TTCCTGTTAT CCGGATTCAT CTTCTTCTGG
TTTTACGCTG ATAAAATCGC GGACAGAAAA ACACCTTTTG GCAATTTCAT GTGTTACAGG
ATTACGCGAC TGTATCCTGT TCACCTGCTT ACACTGATCG CCATTGCGTT GATACAGTAT
GTCATGTTCA GCATGAACGG ACATACCTTT ATCATTCAGA ACAATGACAC CTACCACTTC
CTGCTCAACT TCCTGGTAAT ACACAGCTGG GGATTTGAGA AGACGCCTGC ACTGAACGGA
TTCAATGGTC CTTCCTGGTC TGTATCAGTA GAACTGCTGC TGTACCTGCT CTTCTTCCTG
ATTGCGTGGA GAAAACTCCA TCGCAACAAA GGGCTGATTG TTGCCATGAT CGTGGCCGGC
GCGGTAATAC AGTATATCTA TTCCATGATC GGACAAGGTA TTTATTCCTT CTTTCTCGGC
GGACTCACCT ATCACATCTA TGCATGGATG GTGGAGAAAA AAAAGCTGCG TCGTATCGCC
AATGGGGTGA CGATAGCTGC CTTTGTCCTC TGGGTCATTG TCGTGAGCGA ATATGCATTT
TCTTACATCA GGGATTTCTC CATGCCACTA CTGAAAACCC TATTACCCGG CAAAGATGAA
GCCTTCCATA CTGCATTGTT CAATCTGTCG CGTAATACCT TCTTCCGCAC TATCATATCG
CCTATCACTA TACTGACGCT TGCATTGACG GAAACGACCA GGGGCGGACT AAAAATAAAA
TGGATGCTGG TACTGGGTAA TGCCAGCTAT GCATTGTACC TGCTACATTT CCCCCTGATG
GTAACCTTCT TCATCATGGT AGATATGCTG GGCATCAGCA GGGAGGTATT TCATTCACCG
CTTACACTGC TGATATTCTA TGCTGTATTG ATTCCACTAA GTATACTTAC TCATTATTAC
TTTGAGCTTC CCATCCAGGA ACTATTCAGA AAGCGGCTGC TCAGGAAGCC TGCGCCGGTG
CCCGTTACTG CGGTCAACAA TCAAATTACC ACGTAA
 
Protein sequence
MTPNTSSPRY FFSLDAIRGF AALIVVLCHW QFYFYTDQTL QTKPLEELGL PLFPFLSIFY 
HHAFFAVDLF FLLSGFIFFW FYADKIADRK TPFGNFMCYR ITRLYPVHLL TLIAIALIQY
VMFSMNGHTF IIQNNDTYHF LLNFLVIHSW GFEKTPALNG FNGPSWSVSV ELLLYLLFFL
IAWRKLHRNK GLIVAMIVAG AVIQYIYSMI GQGIYSFFLG GLTYHIYAWM VEKKKLRRIA
NGVTIAAFVL WVIVVSEYAF SYIRDFSMPL LKTLLPGKDE AFHTALFNLS RNTFFRTIIS
PITILTLALT ETTRGGLKIK WMLVLGNASY ALYLLHFPLM VTFFIMVDML GISREVFHSP
LTLLIFYAVL IPLSILTHYY FELPIQELFR KRLLRKPAPV PVTAVNNQIT T