Gene Cpin_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2282 
Symbol 
ID8358437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2813492 
End bp2814394 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content45% 
IMG OID644964468 
Producthemolytic protein HlpA-like protein 
Protein accessionYP_003121974 
Protein GI256421321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00141724 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATACAC CTGTTTTATT ACTCATTTTT AACCGTCCTG GTCAGACCAT GCGTATAATG 
GAAACTATCC GTATGCAAAG ACCCTCACAA TTGTTCGTAG CAGCGGATGG TCCCCGCCGG
TATAAAGCCG GAGAGGATAG TCTGTGTAAG GAAACCAGAG ATACCGTACT TAATTATATA
GACTGGCCAT GTGAGGTAAA AACCCTGTTC AGGGATCATA ACCTTGGTTG CGCCAGGGCT
GTGAGCAGTG CGATTGACTG GTTCTTTTCT GAAGTGGAGG AAGGAATTAT ACTGGAAGAT
GATTGTTTAC CCGATCCTAC TTTCTATACA CTCTGTTCAC AATTACTGGA ACGCTATCGT
GATAACGACC GCGTCATGCA TATAGGCGGT AGTAATTATC AGGCCGGCAT TAACAGAGGC
GATGGTTCCT ACTATTTCTC CCGTTATGCA CATATATGGG GATGGGCTAC CTGGAGAAGA
GCGTGGCGTT ATTATGACTT CTCGCTACAA CGGTATCGGC ATTATTCCAC CAAAGAGCTA
CCGCCTCAGT TTATAAGAGA TCTGGACACC TTCTTTGAAG AAAAAGTGGA TACCTGGGAT
ACACAGTGGT TCCTTTCAGT GCTTTTTAAT AAAGGACTGG CGATCACACC CAACACGAAC
CTGGTCAGGA ACATTGGTTA TGGCAAGGAC GCCACGCATA CCAGAAATGA ACCGGCCTGG
TTTAAGAAGA TGGTATATGG CACTATTCCG GACATCAGAC ATCCTTCGTC CATCAAGCTG
GATGACGAAG CGGATAATTA TACGACAGAT ACGGTATTCA GCTGTAGTTA CTTCTTTCAC
GTGGTCAAAA AGATGGTAAA AAATAATACG CTGTTGTACA GTCTGTACAA ACGCATATCA
TAA
 
Protein sequence
MNTPVLLLIF NRPGQTMRIM ETIRMQRPSQ LFVAADGPRR YKAGEDSLCK ETRDTVLNYI 
DWPCEVKTLF RDHNLGCARA VSSAIDWFFS EVEEGIILED DCLPDPTFYT LCSQLLERYR
DNDRVMHIGG SNYQAGINRG DGSYYFSRYA HIWGWATWRR AWRYYDFSLQ RYRHYSTKEL
PPQFIRDLDT FFEEKVDTWD TQWFLSVLFN KGLAITPNTN LVRNIGYGKD ATHTRNEPAW
FKKMVYGTIP DIRHPSSIKL DDEADNYTTD TVFSCSYFFH VVKKMVKNNT LLYSLYKRIS