Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2282 |
Symbol | |
ID | 8358437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2813492 |
End bp | 2814394 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644964468 |
Product | hemolytic protein HlpA-like protein |
Protein accession | YP_003121974 |
Protein GI | 256421321 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00141724 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATACAC CTGTTTTATT ACTCATTTTT AACCGTCCTG GTCAGACCAT GCGTATAATG GAAACTATCC GTATGCAAAG ACCCTCACAA TTGTTCGTAG CAGCGGATGG TCCCCGCCGG TATAAAGCCG GAGAGGATAG TCTGTGTAAG GAAACCAGAG ATACCGTACT TAATTATATA GACTGGCCAT GTGAGGTAAA AACCCTGTTC AGGGATCATA ACCTTGGTTG CGCCAGGGCT GTGAGCAGTG CGATTGACTG GTTCTTTTCT GAAGTGGAGG AAGGAATTAT ACTGGAAGAT GATTGTTTAC CCGATCCTAC TTTCTATACA CTCTGTTCAC AATTACTGGA ACGCTATCGT GATAACGACC GCGTCATGCA TATAGGCGGT AGTAATTATC AGGCCGGCAT TAACAGAGGC GATGGTTCCT ACTATTTCTC CCGTTATGCA CATATATGGG GATGGGCTAC CTGGAGAAGA GCGTGGCGTT ATTATGACTT CTCGCTACAA CGGTATCGGC ATTATTCCAC CAAAGAGCTA CCGCCTCAGT TTATAAGAGA TCTGGACACC TTCTTTGAAG AAAAAGTGGA TACCTGGGAT ACACAGTGGT TCCTTTCAGT GCTTTTTAAT AAAGGACTGG CGATCACACC CAACACGAAC CTGGTCAGGA ACATTGGTTA TGGCAAGGAC GCCACGCATA CCAGAAATGA ACCGGCCTGG TTTAAGAAGA TGGTATATGG CACTATTCCG GACATCAGAC ATCCTTCGTC CATCAAGCTG GATGACGAAG CGGATAATTA TACGACAGAT ACGGTATTCA GCTGTAGTTA CTTCTTTCAC GTGGTCAAAA AGATGGTAAA AAATAATACG CTGTTGTACA GTCTGTACAA ACGCATATCA TAA
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Protein sequence | MNTPVLLLIF NRPGQTMRIM ETIRMQRPSQ LFVAADGPRR YKAGEDSLCK ETRDTVLNYI DWPCEVKTLF RDHNLGCARA VSSAIDWFFS EVEEGIILED DCLPDPTFYT LCSQLLERYR DNDRVMHIGG SNYQAGINRG DGSYYFSRYA HIWGWATWRR AWRYYDFSLQ RYRHYSTKEL PPQFIRDLDT FFEEKVDTWD TQWFLSVLFN KGLAITPNTN LVRNIGYGKD ATHTRNEPAW FKKMVYGTIP DIRHPSSIKL DDEADNYTTD TVFSCSYFFH VVKKMVKNNT LLYSLYKRIS
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