| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2279 |
|---|
| Symbol | |
|---|
| ID | 8358434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2810202 |
|---|
| End bp | 2810939 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644964465 |
|---|
| Product | methyltransferase FkbM family |
|---|
| Protein accession | YP_003121971 |
|---|
| Protein GI | 256421318 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01444] methyltransferase, FkbM family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.18943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTA TCTTCAAACT GGCAGACGCT GCCAAAGTCT TTTTACAATC CGGCAGAGGA
TTAACTTCAC TCCTGAAGAA GGGCGTATCT ATCGCCTCCA CGCAACTGTT ACACAACTGT
AAGCATTACA TCCCCGAAGT GAACACCATC CTGGATGTAG GCGCCAACAG GGGCCAGTTT
GCTCTTTCTG CCAAACACTT TTATCCGGGC GCTGGTATTC ATTCCTTCGA ACCCATACCG
GAGGTGTACT CTACTTTACA ACAGAATACA CGACATATTC CACGGATCCA TACCTACAAC
TTTGCATTGG GCAGTACAAA CGGTGTGCTG GAGTTTTATG CGAATCATTA TTCACATGCC
AGCTCCGCCT TACATGTATC CTCTCTGCAA CAACAGCTGT TACCACAGAC GGCAGAAGCA
GATCAGATCA AAGTGCCTGT AAAATGTATG GACGATCTGC TGCCGACATT GCCTGTAAAA
GCGCCGGTAT TACTGAAACT GGATGTACAG GGCTTTGAGA AGGAAGTATT AAAAGGAGCA
GTACATTGCC TGGGGCAAAT AGATTATCTC CTGTTTGAGA CATCCTTTGT ACAGATGTAT
GACGGAGAGC CATTGTTCGA CGAAATGCAC AATTATGTAA AGGAGCTTGG CTTCGAATTT
ATAGCACCGG TAGGCTTTTT ACAAACAGAC GATCTTCAGA TCCTGCAAAT GGACCTTCTC
TATAAAAGAA GGAGATAA
|
|---|
| Protein sequence | MNLIFKLADA AKVFLQSGRG LTSLLKKGVS IASTQLLHNC KHYIPEVNTI LDVGANRGQF
ALSAKHFYPG AGIHSFEPIP EVYSTLQQNT RHIPRIHTYN FALGSTNGVL EFYANHYSHA
SSALHVSSLQ QQLLPQTAEA DQIKVPVKCM DDLLPTLPVK APVLLKLDVQ GFEKEVLKGA
VHCLGQIDYL LFETSFVQMY DGEPLFDEMH NYVKELGFEF IAPVGFLQTD DLQILQMDLL
YKRRR
|
|---|
| |