Gene Cpin_2266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2266 
Symbol 
ID8358421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2794937 
End bp2796322 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content38% 
IMG OID644964452 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003121958 
Protein GI256421305 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAAC ACTTATTTTT ATTACTGGCT TCGTTTTTCC CAATTGCGGT TTGTGCGCAG 
GTAAAAGAGC CATTTGACAA GTATATCGCT GCAGTTAGTC AACCCGGTCT AGGTGAGGTA
GTGCCTGATC TCCGATTTCA TAATGTACTT AATTACAAAA AACAGCAGGT TCGCTTGTCT
GAATTTAAGG GAAAAGCAAT ACTGATTGAT TTTTGGGCTT CTTTTTGTCA ACCTTGTCTG
GCACAATTCC CCAAGTTACA GGGCATACAG GATAAATTTC AGAAGGAACT GCAGGTTATT
ACTATCACCA GTGATCAGCA GGAGAAGATC GTGCATATGT TTAATAATAT CCGCTCTCAG
GGTTTTAAGA TGTTAACAGC TACAAATGAT GCAAAAGGAT CAAATGATAT TATATTCTCA
ACCTTTCCAC ATAAATATAT TCCTCATTAT GTATGGATCG ATAAAAACCA GGTCCTGAAG
GCTGTGACTG GCTACGAGGA GTTAACAGAG GATAATATCG CTAAACTGAT AGCTGGGAAT
TCTTTGTCTG ATGTAAATCA TAAGACGGAA GATATTTTGA ATATGTCACA TCCTGCATTA
TTTACCTATC AGGAGTTGGG TATGGCAGAA AAGATGATGC TGAATGATTC TATTGCCGGG
TTGTTAGAAT ATTCTATGTT GTCTGGTTAC AATAAAAAAT ATCCTCCCAG TTCCGGGATT
GACTTTACAG GTATTTATGC AGAACGAAGA ATACGCTTAT GGAATTTGCC ACTATGTACA
ATGTTACGCC TTGCTTTTGG TAAGTTAAGT ACTGATCCGC GGGAGCAGGA ATTAGTGCCA
ATGCCTAGGG TCTTTTTTAA TATAAGGGAC AAAGCTATTC TCGATAAATT GTTGGTCAAT
TTTACAGAAG CGCCTGACTC TACTTCTGAC ATGTATTGTT ATGATCTTAT TGTAAACAAG
AAAGGTATGA GGAGCCTCCA GGATAAAATG AAGGAAGACC TATACAAATA TTTTGGAGTA
AGGGGCACAC ATGTTAAAAA GAAGATTGCT TGCTATGTTT TGACCATGAA AGATAGCTTA
AAGCTGACGG CTAGTGACGA AAACTATCAT GAGGAAGGGA ATATGTATTA TTTAAAACTA
AAAAATACTC CTTTTCCAAA ATTAGTCCAG CATATTAAAG GCTATAATGA AAATAGCAAA
TCTTCTCCTT ACAGAGGTCT GGAATCTGCG ATAATAATCG ACGAAACCCA CTTTGTATCA
AGAATAGATA TTAATCTTAC CGTGTGTATG AATGATATAC CAGCTTTAAA GTCAGCACTC
GCGCAATATG GAATTGAACT TTGTGAGGAC GAAAGAATGG TCGACGTATT ACTGCTGGAA
GATTAG
 
Protein sequence
MWKHLFLLLA SFFPIAVCAQ VKEPFDKYIA AVSQPGLGEV VPDLRFHNVL NYKKQQVRLS 
EFKGKAILID FWASFCQPCL AQFPKLQGIQ DKFQKELQVI TITSDQQEKI VHMFNNIRSQ
GFKMLTATND AKGSNDIIFS TFPHKYIPHY VWIDKNQVLK AVTGYEELTE DNIAKLIAGN
SLSDVNHKTE DILNMSHPAL FTYQELGMAE KMMLNDSIAG LLEYSMLSGY NKKYPPSSGI
DFTGIYAERR IRLWNLPLCT MLRLAFGKLS TDPREQELVP MPRVFFNIRD KAILDKLLVN
FTEAPDSTSD MYCYDLIVNK KGMRSLQDKM KEDLYKYFGV RGTHVKKKIA CYVLTMKDSL
KLTASDENYH EEGNMYYLKL KNTPFPKLVQ HIKGYNENSK SSPYRGLESA IIIDETHFVS
RIDINLTVCM NDIPALKSAL AQYGIELCED ERMVDVLLLE D