Gene Cpin_2251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2251 
Symbol 
ID8358406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2771330 
End bp2773588 
Gene Length2259 bp 
Protein Length752 aa 
Translation table11 
GC content47% 
IMG OID644964437 
Productcoagulation factor 5/8 type domain protein 
Protein accessionYP_003121943 
Protein GI256421290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGGA TGATGCACAG CTTACTGCTT ATTATGACAC TGCTGACCTA TAATAGTTGT 
CAATCCTCTA AAGGGAATAT CGATCTGGTG TCAGGTGGCA GTTCAAAATA TGTCATTATC
CTGCCGGATG AAGCGACCAA ACATGAAACG AAAGCAGCTG CCCTGTTACA GGATTATATC
AAACGCCTCT CAGGTGCTTC CTTGCCCATT ATTACAGAAA AAGCGTTCAA AGATCAGCCA
GGGGTCTTTA TAGGCAATAC GGAATATACC AGTTCCCTTT ACCCGGAAAA GTTAAAAGGA
GAAGGTTTTC TGATCGCTAC CGGCAAACAG GATATATATA TCAAAGGGGG AACCGGCAAA
GGTATTTTGT ATGGCGTGTA TACCCTGCTG GAAAATTATT TCGGTTGCCG GAAATATGCA
GACATACCGG TCTTCATACC GGTATCTAAA CAACTGCAGT TGCCGCAGCA ACTAAGAGAT
CGGCAGATGC CTGCCTTTTT ATACCGGGAA ACCTACTACC CTGCTGCATT CAATGATGAA
TACCTGGAAT GGCACAAGCT GCACCGCTTC GAAGACCTGT GGGGATTGTG GGGACATTCC
TTCTTTAAAA TATTGCCACC TAAAACTTAT TTCGCGGCAC ATCCGGACTA CTATGCACTT
GTCAACGGGA AACGACAGGC CAGCCAGCTA TGTCTGAGTA ATGAAGGCGT TTATACCTTC
ATGGTAGATT ATTTCCGGAA AGCAATTGCG GATAATCCGG ATGCGATGTA CTGGTCGATT
GCTCCCGAAG ATGGCGGTGG CTTCTGTACC TGTGATCAAT GTAGTAAGGC CAATGCAGCA
GAGGGTGGTC CACAGGGTAC ACTGATCCGG TTCATCAACC GCATTGCAGC CGCCTTCCCG
GCACAACAGT TTACCACACT TGCGTACCAG TATACGGCAC ATCCTCCCCT GAAAACAAAA
CCTGCCGGCA ATGTATACAT TATGCTCAGC AGTATCGATG CGTATCGCCA GGAGCCGCTG
AGCAGTATTT CTTCTGCCGC GGCTTTCAGA AGAGATCTGG AAGGATGGAG CGCTGTAACG
GAGCATATTT TCCTATGGGA TTATACCACA CAATTCACTA ATTACCTGGC CCCTTTCCCT
GACTATAACA ATCAGCAGGC GAATCTGCAA TACCTGGCCG CGCACAAGGT CCAGGGTGTT
TTTTCTCAGG GCAGCGGAGA TACCTATAGC GATATGGCGG CCTACAATAG TTATCTGCAG
GCTAAATTGC TGTGGAATCC CGGACTGACA ACGGAAGAAA TCACCAGTGA TTTCCTGAAC
GGCTATTATG GCAAGGCAGG ACCATTTGTC GCACAATATC TTCAGGCATT AACCAACACC
CTGCACATTA CCAAAACACA ACTGGATATT TACGGCAATC CCGTTAATAA CTACAAAAAC
TATCTGTCCC CGGAGGCGAT CGATCAGTAT TCCTCCTTAC TGGACAAAGC TGAAAAGGCA
GTGGAAGGAA ATGATTCACT GCTGGCAAGA GTATACAATA CGCGTTTACC GCTGGAATAT
ACCGTGCTGC AACAATCCCG CTTTTTCGGC ACAGAGAAAT TCGGTTACCT GATCCCCGAA
GGGAATGGTT TTACTGTCAA TCCACGCTGG CCGGAACGCG TAAAGAAATT CGTTGCCCAA
TGCAAACTTG CAGGTGTAAA AGAACTATCT GAAGGGGGTG GTAGTCCAGC TACTTATCAA
CAGGAATGGG ACCAGATCTT CTCCCGCAAA TGGATTAACA GTCTGGCGTT CCGTGGCAAA
GTGAGTCTTG TAAATTCCTG GGCAGAAGAT TATCCTGCCA AAAAAGAACA GACGCTGACA
GATGGTTTGC AGGGAGATAA GGATTTCAGT ATCAACTGGC TGTTTATCTA TGGTAAAGAC
CTGATAGCCA CTGTTGATCT GGGTACCGAA CAGACTGTGA AAGAAATACA GCTGAATTTC
TTACAGGATG CCCGCCATTA CATTTTTAAC CCTACTGATA TTATTGTAGA AACCTCTGTG
GATGGGGCGA ACTTCACACC TGCCGGTAAA CAGCAAACAT CCCCTCTTGC CACAGAAGAA
TATGATGCAA AGATCAACAC TTACCGGTTC TCATTACCTG CTGTAAAAGC CCGCTATATC
AGGGTAACAG GCAAGTGTCT GCAAACGATT CCTGCATGGA GAGACGCTCC CGCCGCCAAG
AAAGCCGCAA TATGCTGCGA TGAAATCTAT GTATTATAG
 
Protein sequence
MFRMMHSLLL IMTLLTYNSC QSSKGNIDLV SGGSSKYVII LPDEATKHET KAAALLQDYI 
KRLSGASLPI ITEKAFKDQP GVFIGNTEYT SSLYPEKLKG EGFLIATGKQ DIYIKGGTGK
GILYGVYTLL ENYFGCRKYA DIPVFIPVSK QLQLPQQLRD RQMPAFLYRE TYYPAAFNDE
YLEWHKLHRF EDLWGLWGHS FFKILPPKTY FAAHPDYYAL VNGKRQASQL CLSNEGVYTF
MVDYFRKAIA DNPDAMYWSI APEDGGGFCT CDQCSKANAA EGGPQGTLIR FINRIAAAFP
AQQFTTLAYQ YTAHPPLKTK PAGNVYIMLS SIDAYRQEPL SSISSAAAFR RDLEGWSAVT
EHIFLWDYTT QFTNYLAPFP DYNNQQANLQ YLAAHKVQGV FSQGSGDTYS DMAAYNSYLQ
AKLLWNPGLT TEEITSDFLN GYYGKAGPFV AQYLQALTNT LHITKTQLDI YGNPVNNYKN
YLSPEAIDQY SSLLDKAEKA VEGNDSLLAR VYNTRLPLEY TVLQQSRFFG TEKFGYLIPE
GNGFTVNPRW PERVKKFVAQ CKLAGVKELS EGGGSPATYQ QEWDQIFSRK WINSLAFRGK
VSLVNSWAED YPAKKEQTLT DGLQGDKDFS INWLFIYGKD LIATVDLGTE QTVKEIQLNF
LQDARHYIFN PTDIIVETSV DGANFTPAGK QQTSPLATEE YDAKINTYRF SLPAVKARYI
RVTGKCLQTI PAWRDAPAAK KAAICCDEIY VL