Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2246 |
Symbol | |
ID | 8358399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2763648 |
End bp | 2764673 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964430 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003121938 |
Protein GI | 256421285 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0322727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTGTAT TACCATCGGT AGCTGTTGTT ATATTGAATT GGAATGGACG TAGTTTTCTG GAAAAGTTTC TGCCATCGGT ATGCAGTTCT ACATACGGGA ACCTGCAACT GTATGTGGCG GATAATGCTT CTACAGATGA CAGTGTGGCA TTTGTGCGTG AAAAGTTTCC GCAGGTCAGC ATTATTCAGA ATCCCACCAA CGACGGGTTT GCGGGCGGTT ATAACATGGC CCTGCAGCAT GTAAAGGCGG ATATATATGT ATTACTGAAT CAGGATGTGG AAGTGGAACC GGGCTGGATT GAGCCGGTTG TGGCGCAGAT GGTACGCGAT CATCATGTAG CTGCCTGTCA GCCTAAATTA CGTTTCTATC ACAACAAGCA GGAATTTGAA TATGCCGGAG CGGCAGGAGG ATGGATGGAT ATCCTGGGAT ATACCTTCTG CAGAGGCAGA ATATTATATA CCACAGAGAT GGACGAGGGA CAGTATGATG ATGCACAGGA TATTTTCTGG GCAACAGGTG CCGCGCTGTT TATCCGTTCG GCCTGTTTTC ATGAAGTAGG CGGTTTTGAC GCCAGTTTCT TCGCCCATAT GGAAGAGGTA GATCTGTGCT GGCGACTCAA AAGAGCCGGT TACCGTATCT GTTACTGTCC GGATTCTATT GTATATCATG TGGGAGGGGG GAGTCTGCCG CAGGGCAATC CCCGTAAACT GTACCTGAAC TTCCGGAATA ACCTGATGAT GTTGTGGAAA AACCTGCATC CGGCTGACCG CTGGATCGTA TTATCCCAAC GTTTTTTCCT GGACCTGCTG GCGGCCGTGA AGAGCCTGGT GGCAGGGAAG CCTGCTGATA TGAAGGCGAT ATTCAGGGCT TATGTGGATT ATCGTCGTTG GCGGAAGAGT TATAAATTAT CGTCCGACAG GCTACCACAG AAGCGTTTGC TGGAACTATC AGGGGTCTTT CATGGTATCA TGATATGGCG TTATTACTTC CTGAACCGTA AGACTTTCGG GACTTTGGAA AAATAA
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Protein sequence | MSVLPSVAVV ILNWNGRSFL EKFLPSVCSS TYGNLQLYVA DNASTDDSVA FVREKFPQVS IIQNPTNDGF AGGYNMALQH VKADIYVLLN QDVEVEPGWI EPVVAQMVRD HHVAACQPKL RFYHNKQEFE YAGAAGGWMD ILGYTFCRGR ILYTTEMDEG QYDDAQDIFW ATGAALFIRS ACFHEVGGFD ASFFAHMEEV DLCWRLKRAG YRICYCPDSI VYHVGGGSLP QGNPRKLYLN FRNNLMMLWK NLHPADRWIV LSQRFFLDLL AAVKSLVAGK PADMKAIFRA YVDYRRWRKS YKLSSDRLPQ KRLLELSGVF HGIMIWRYYF LNRKTFGTLE K
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