Gene Cpin_2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2244 
Symbol 
ID8358396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2761332 
End bp2762087 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content47% 
IMG OID644964427 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003121936 
Protein GI256421283 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGGTC TGCAAATATC CGCGCAGTCT CCGGTTGCCA CAAAACCTTA CCGTCTGATT 
GCTCATAGAG GTCGTGTAGT AGATAGTACA ACTGACCAGA ATAGCCTGGA GGCACTTAAT
AAGGCGATCG CCCAAGGTTA CTGGATGGTT GAGGTGGATC TGCGGATGAC CAAGGACAGT
GTCCTCATCA CACACCATGA TAAAAACTTC CGTTATTCTT TTGGTCTGGA CTCCGCAGTC
TCTTCTATGA CCTGGGCGGC TATCAGTAAA TTGCGTAATG CCAACGGTTA CCGGGTACAG
CGATTTGAAG AAGTACTGGC GCATTGCGAA GGGAAACTCG GCGTCATGAT CGATAATAAG
CTGGAGGGAA ATGATACGGC TGTCTGGATC CGTTTGACCA CTTTATTGAA AAAGTATGAC
TTATATAAAA GCGCACTGAT GATTGGTACA GACGAATCCA CTCCATACTT CACCGGAAAG
GTCAGACTCA GTTGTACCCG TCAGCAGCTG GAAACTAATA TTAACAGACC TGACTACAAG
GCGTCTAATT ATTACCTTTT TTCTGATAAG ATCAGTAAGG AGGATTATGT CTGGGCATAC
GGTCATAACA TCCTGGTGGT GGGTGTGATC AATGCCTGGG CATTCCAGCC GGGGGAATCG
GTAACTAAGG CAGCTGCGCA GGCAGCAGCG TTGAAGGCAG CGGGTGTGCA GTGTTTTCAG
ATTGATGCGG AGTATCAACC GTTATTTCAA AAGTAA
 
Protein sequence
MAGLQISAQS PVATKPYRLI AHRGRVVDST TDQNSLEALN KAIAQGYWMV EVDLRMTKDS 
VLITHHDKNF RYSFGLDSAV SSMTWAAISK LRNANGYRVQ RFEEVLAHCE GKLGVMIDNK
LEGNDTAVWI RLTTLLKKYD LYKSALMIGT DESTPYFTGK VRLSCTRQQL ETNINRPDYK
ASNYYLFSDK ISKEDYVWAY GHNILVVGVI NAWAFQPGES VTKAAAQAAA LKAAGVQCFQ
IDAEYQPLFQ K