Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2230 |
Symbol | |
ID | 8358382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2747444 |
End bp | 2748268 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964413 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_003121922 |
Protein GI | 256421269 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.332513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAC AGGAACTGGT GAATCTGATT AAAGAGAAGC AATCTTATCT CTGTGTGGGA TTAGATACTG ATCTTCAAAA GATCCCCCGC CATCTACATT CCCATCCAGA CCCCGTATTT GCTTTCAACA AGGCTATTAT TGATGCCACA AAGGATCTCT GCGTATCCTA CAAGATCAAT ACAGCTTTCT ATGAGTGTAT GGGTATCCGT GGCTGGGAAA GCCTGCAACG TACGGTGGAA TATATCCCTT CCGGGCTGTT TACCATTGCA GATGCAAAAC GGGGAGACAT TGGCAACACC TCCACGCAAT ACGCCAAAAC ATTCTTTGAG ACATATAACT TTGATGCAGT GACCGTTGCA CCTTATATGG GCCGTGACAG CGTACTGCCT TTCCTGGCTT TCAATGAAAA ATGGACCATT ATGCTGGGTC TTACTTCTAA CGAAGGCAGC CAGGACTTCC AGTTACAACA ATCCGGCGAC GAATTCCTGT ATGAAAAGGT GATGAAAGCC GGTATGAACT GGGGTACGCC TGACAACCTG ATGTTTGTAG TAGGTGCAAC CCAGTCCGCT CAGTTGGGCT ACATCCGCAA ACTGGTACCT GATCACTTCT TCCTGGTACC TGGTGTGGGT GCACAGGGCG GTAATCTGCA GGAGATCTCC GCACAGGCGA TGAACAAAGA TTGCGGATTA CTGGTAAATG CCAGCCGATC CATCATTTAT GCCGGTAACG GTGAAGATTT CGCTCAGGAT GCCCGTAACG CCGCACAGCA GTTACAGCAG GAAATGGCCG GATACCTTGG TGTAAAACAG ACTTTAGTTC CTTAA
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Protein sequence | MNRQELVNLI KEKQSYLCVG LDTDLQKIPR HLHSHPDPVF AFNKAIIDAT KDLCVSYKIN TAFYECMGIR GWESLQRTVE YIPSGLFTIA DAKRGDIGNT STQYAKTFFE TYNFDAVTVA PYMGRDSVLP FLAFNEKWTI MLGLTSNEGS QDFQLQQSGD EFLYEKVMKA GMNWGTPDNL MFVVGATQSA QLGYIRKLVP DHFFLVPGVG AQGGNLQEIS AQAMNKDCGL LVNASRSIIY AGNGEDFAQD ARNAAQQLQQ EMAGYLGVKQ TLVP
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