| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2221 |
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| Symbol | |
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| ID | 8358373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2738458 |
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| End bp | 2739516 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644964404 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_003121913 |
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| Protein GI | 256421260 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0345512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGCT CTTTCGATGA ATTTTACATG CAAAGATGTC TGCAGCTGGC AAAGCTGGGG
GCAGGAAATG TAGCGCCTAA TCCGATGGTG GGGGCTGTAT TGGTGTATGA AGGCCGTATT
ATTGGTGAGG GTTATCACCG GCAGTATGGT TTTGCACATG CGGAAGTGAA TTGTGTGCAT
TCCGTAAAAC CGGAGGATCA ACACCTGATT CCGGCAGCTA CGATGTATGT GAGTCTGGAG
CCCTGTGCAC ACTATGGAAA AACGCCTCCC TGTGCAGAAC TGATCGTATC GCAGCAAATA
AGCACCGTAG TGATCGGTTG TGTGGACACC TTCTCACAGG TGGCTGGTAA AGGTATCGGG
ATACTGAAGG CGGCAGGAAT TACTGTGCGG ACGGGTGTAC TGGAAGCCGC CGCCCGCGAA
CTGAACAGTC GCTTTTTCAC ATTCCATGAG CAAAAACGGC CCTATATCAT ATTGAAATGG
GCTCAAAATG CAGATGGTTT TATGGCAGGA GCGGACGGAA GACCGGTTCG TATCTCTAAT
CCGCTGACAG ACAGACTGGT ACACCGCTGG CGGAGTGAAG AAATGGGCAT ACTGGTGGGT
ACAAATACTG CTGTTGCTGA CAATCCACGA CTGAATAACC GTCTCTGGAC AGGGAAAGAT
CCTGTCAGGA TAGTGATAGA CCGTACGCTG AAAACACCAC GTGAATATCA TCTCTGGCAT
GGTCCTGCTA CATTGTTCAT TACCGCTGAA CAGGCAGAAA AGCAGGATAC AGCAGAAATG
GTAACTGCAG ATTTTTCCCA GCCCTTACTA CCGCAACTGA TGAAGATCCT GCACGACAGA
CGCATTCTGA GCGTACTGGT AGAAGGAGGT GCACATGTAT TGCGGGAAAT GACTGAAGCC
GGATTATGGG ATGAAGCCCG TGTCATCATT GGGGATAATC CATTTGCCCT GGGCGTGAAA
GCACCTGTAT TACCACATGC GCTGTTGAAA GAAACACAAA TACTGGAAAG TGACCAGATA
CTGTTTTACC GGAACATAAA GGAGGAAAAG ACCGCATGA
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| Protein sequence | MDSSFDEFYM QRCLQLAKLG AGNVAPNPMV GAVLVYEGRI IGEGYHRQYG FAHAEVNCVH
SVKPEDQHLI PAATMYVSLE PCAHYGKTPP CAELIVSQQI STVVIGCVDT FSQVAGKGIG
ILKAAGITVR TGVLEAAARE LNSRFFTFHE QKRPYIILKW AQNADGFMAG ADGRPVRISN
PLTDRLVHRW RSEEMGILVG TNTAVADNPR LNNRLWTGKD PVRIVIDRTL KTPREYHLWH
GPATLFITAE QAEKQDTAEM VTADFSQPLL PQLMKILHDR RILSVLVEGG AHVLREMTEA
GLWDEARVII GDNPFALGVK APVLPHALLK ETQILESDQI LFYRNIKEEK TA
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