| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2208 |
|---|
| Symbol | |
|---|
| ID | 8358360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2728556 |
|---|
| End bp | 2729572 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644964392 |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_003121901 |
|---|
| Protein GI | 256421248 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000773394 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACAG TTAATGCATG GGCTCAGCTG GAGCCAAAGG GTAAACTACA GCCCTATAGT
TATGAGTTAT CGTCCGTTAC AGCGGAGGAA GTGGAAATAG TTATTGACAA TTGTGGATTA
TGTCATACAG ATCTTTCTGT ACTGAATGGC GACTTCGGAT TACCATTCCC GGTTGTGGCA
GGACATGAGA TCACCGGCCG CATTGTCGCT CTTGGTGAAG TGGCAAAAAC CAAGGGATTG
TCCGTCGGAC AAACTGTGGG TCTGGGCTGG AATAAAGAAA GCTGCGGACA TTGCGACGCT
TGTCTCGCTG GAGATGCACA TTTATGTGTA AACCTGAAAG CCACCGTACT GGGATATCAT
GGCGGATTTG CCAACCGTAT CAAAGCACAC TGGTTATGGG TAATACCTGT CCCTGAAGGT
CTTCATGCGG CAGATGCAGG ACCGCTTTTC TGTGCAGGTA TCACCGTATT CTATCCGTTA
CTGGAATACG GCATCCAGGC TACTGACAAA GTAGGTGTTA TCGGCGTAGG CGGACTCGGA
CATCTGGCTG TACAGTTTGC ACATGCCTGG GGAGCTGAGG TAACAGCATT TTCTTCTACA
CCTGCAAAAT TTGAAGAAGC AAAAAAGCTG GGCGCAGATC ATGTTGTTTC CAGCAGGAAC
AGCGAAGAAT GGTCATCACT AAAAGGACAT TTTGATCTGA TTATCGTGAC AGTAGGCGTC
ACACTGGAAT GGGACAAGAT CATTGCTATG TTATCGCCAA GAGGCAGACT GCATTTCGTG
GGTATTCCCT ATGAGGCGAT ACCGGTAACA GTGTTATCAC TATTAATTCC GCAAGCAGTA
GTATCTGCTT CTCCCGCCGG CTCCAGAAGC GCCTTTGATA AAATGCTCCG CTTTGCAGCC
AGACATAATA TCAGGGCCAT GGTGGAACAT TTCCCTATGA GCAGGATCAA TGATGCCATT
GAACATCTTG AATCCGGCAA AGCGAATTAC CGCGTTGTTT TAGATGTAGA TTTCTAA
|
|---|
| Protein sequence | MSTVNAWAQL EPKGKLQPYS YELSSVTAEE VEIVIDNCGL CHTDLSVLNG DFGLPFPVVA
GHEITGRIVA LGEVAKTKGL SVGQTVGLGW NKESCGHCDA CLAGDAHLCV NLKATVLGYH
GGFANRIKAH WLWVIPVPEG LHAADAGPLF CAGITVFYPL LEYGIQATDK VGVIGVGGLG
HLAVQFAHAW GAEVTAFSST PAKFEEAKKL GADHVVSSRN SEEWSSLKGH FDLIIVTVGV
TLEWDKIIAM LSPRGRLHFV GIPYEAIPVT VLSLLIPQAV VSASPAGSRS AFDKMLRFAA
RHNIRAMVEH FPMSRINDAI EHLESGKANY RVVLDVDF
|
|---|
| |