Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2206 |
Symbol | |
ID | 8358358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2725708 |
End bp | 2726526 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644964390 |
Product | signal transduction histidine kinase |
Protein accession | YP_003121899 |
Protein GI | 256421246 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000133722 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTGCCTGC ATTCCACGTT TGTTGACGCT GGTACCGGAT ATCCGTTATA TGCCATTGCT GGTATTGTAT TACTGCTGGT GACTGGTGTT GTGATCTGGC GTCAGGGAAG GAAATATCAT CAGGCCCTTC AGGAAATAAC ATCTTTACGG TGTAAGCTGA ATGAGTTTGA CCGGTATCTT GGAAATATTA CCCGTGAAAA AGACTGGCTG ATAGAAGAAA CACATCATCG GGTAAAGAAT AATCTGCAGA TGGCGATTAG TTTGCTGAAT ACCCAGTATA CCTTCCTGGC AGATAACGAA GCTCGTCAGG CAGTCCGTAA TACACAACAC AGAATGTTTG CTATTTCGCT GGTATACCAG AAACTGTATC AGGAAGATGC ATTATCAACA ATTGATATTC CCCAGTATAT CAGCGAACTA TTGGATTATC TTAAAGATGA ATATGAAGTA GCTGCCGATA TAGACTTCAA TCTTAAAACA GTACCTTTAA AGCTCGATGT TACACTCGCT ATACCCTTCG GACTCATTAT CACAGAAGCC ATCAGTAATA TTTTCAGACA TGCTTTTACC GGCAGGGAAG ATGGCAGCGT ATACATCTCC ATGCAAAGCA ATAACGGCAG GCATTATAAA TTGCTGATAA AGGATAATGG GGTAGGACTG CCTGTTTCTT TTGATCCTTA TGCGGACACC TCTATGGGAT TGATGCTGAT GACAGGATTA AGCCGGCAGG TGAGGGGAAC TTTACAGATC TGCAATGATA ACGGCGTTAC CATCGTACTG GAATTTCTGA ACGATGGCAG GCTGCCGGAG AATTTATAA
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Protein sequence | MCLHSTFVDA GTGYPLYAIA GIVLLLVTGV VIWRQGRKYH QALQEITSLR CKLNEFDRYL GNITREKDWL IEETHHRVKN NLQMAISLLN TQYTFLADNE ARQAVRNTQH RMFAISLVYQ KLYQEDALST IDIPQYISEL LDYLKDEYEV AADIDFNLKT VPLKLDVTLA IPFGLIITEA ISNIFRHAFT GREDGSVYIS MQSNNGRHYK LLIKDNGVGL PVSFDPYADT SMGLMLMTGL SRQVRGTLQI CNDNGVTIVL EFLNDGRLPE NL
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