| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2203 |
|---|
| Symbol | |
|---|
| ID | 8358355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2723144 |
|---|
| End bp | 2724217 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644964387 |
|---|
| Product | fructose-bisphosphate aldolase |
|---|
| Protein accession | YP_003121896 |
|---|
| Protein GI | 256421243 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00000255438 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCAG AAAAAATCAA TGGCATACTC GGGGATGAAG CCCAGGATTT GCTGACTTAT
AAATGCACCA AAGTACCGAA AGAACGATTA CACCTCCCCT CAGCTGATTT TCTTGACAAA
CATTTTGTGT TTTCTAACCG AACGCCTCAG ACATTGAGAA GCCTGGCACA ATTATATGGT
GCAGGCCGTC TCGGCAGAAC GGGATATGTA TCAATATTAC CTATAGATCA GGGAATCGAA
CACAGCGGAG GCGCCTCATT TGCTGCCAAT CCTATGTATT TTGATCCGGA AAACATCGTC
AGACTAGCCA TCGAGGGAGG ATGTAACGGT GTGGCGACTA CTTACGGCGG ACTCGCACTT
ATGTCTCGTA AGTATGCGCA TAAAATACCT TTTATCGTTA AGATCAATCA CAATGAACTG
CTCACCTATC CCAACAGCTA TGAGCAGATT ATGTTTGGTA CCGTAAGAGA CGCCTGGAAT
CTGGGCGCTG TTGCCGTCGG TGCTACTATT TATTTCGGTT CTTCAGACGC CCGGAGGCAG
ATTACAGAAG TAGCCGCTGC ATTTGAAGAA GCACATTCAT TGGGTATGGC GACTATCCTC
TGGTGTTATC TGCGGAATGA CGCCTTCAAA ACCGGAGGGA AAGACTATCA CATATCAGCA
GATCTTACCG GCCAGGCCAA TCACCTGGGG GTAACCATAC AGGCAGATAT CATCAAACAG
AAACTGCCTG AAAATAATGG CGGATACAAG GCACTTAATA TGGGTAACAG CAGCTATGGT
AAACTGGACG AAAGAATGTA CACCGATCTG GCTACTGATC ACCCGATTGA TCTTTGCCGC
TACCAGGTAT TGAACTGTTA TAGTGGTCGT ATAGGACTGA TCAATTCAGG CGGCGCATCA
TCCGGCGCAG GAGATCTGAA AGAAGCCGTT AAAACAGCCG TTATCAATAA ACGTGCAGGT
GGTATGGGAC TTATTTCAGG AAGAAAAGCA TTCCAGCGTC CGTTTGAAGA AGGCGTATCA
CTGCTGCACA CCATACAGGA CGTTTATTTA TCAAAGGATA TTGATATTGC TTAA
|
|---|
| Protein sequence | MTPEKINGIL GDEAQDLLTY KCTKVPKERL HLPSADFLDK HFVFSNRTPQ TLRSLAQLYG
AGRLGRTGYV SILPIDQGIE HSGGASFAAN PMYFDPENIV RLAIEGGCNG VATTYGGLAL
MSRKYAHKIP FIVKINHNEL LTYPNSYEQI MFGTVRDAWN LGAVAVGATI YFGSSDARRQ
ITEVAAAFEE AHSLGMATIL WCYLRNDAFK TGGKDYHISA DLTGQANHLG VTIQADIIKQ
KLPENNGGYK ALNMGNSSYG KLDERMYTDL ATDHPIDLCR YQVLNCYSGR IGLINSGGAS
SGAGDLKEAV KTAVINKRAG GMGLISGRKA FQRPFEEGVS LLHTIQDVYL SKDIDIA
|
|---|
| |