| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2191 |
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| Symbol | |
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| ID | 8358343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2694371 |
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| End bp | 2698030 |
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| Gene Length | 3660 bp |
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| Protein Length | 1219 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964375 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003121884 |
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| Protein GI | 256421231 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0107052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000255411 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAAGA AGGCAACCCT ATCCCTCCGC CTGACCGTGC TTGCGCTGCT GATCCTGTTG
TCACAGGCCA TCGCAGTTCC CGCAAATGCT TCAGGAATAC AGGATGCGCT CGACAAGAAG
ATTTCTCTGG AACTGAAAAA TGTGTTGCTG AAAGAAGCAC TCGACCAGAT CGGTAATCTC
GCAGAAGTCT CTTTTATCTA TGCAGGCAAC AAAACGATTG TCGGCAATAA GGTAGATGTA
AACGCTCACA ATGAAAAAGT GAGCGACCTC CTTAAAAAGC TGCTTAAGCC ACTATCACTT
TCCTATACGG TTGTATACGA CCGTGTAGTG ATCCGGCCCG TTGAAAAAAA AATGGAAGGC
CTCTCCGTAC CGGAAAGCGA ACGCCAGGTA GCACCCCGTA CCCAGGACAT AAGAGGTACG
GTGGCGTCCC CAAAAAATGA GGCACTACCC GGCGTAGCTA TTATTATTAA AGGGACTAAC
CGTGGTACTA CTACTGATGA AAAAGGTTTT TTTCAATTGA AAGGCGTTCC TGCCGATGCC
ATACTGGTAT TCAATTTTAC CGGATATCAG CAGGAAGAAG TGAGTGTTGC CGCTTATAAA
AATGGCGTAA TCAACATTCA GCTGAAAGAG AAAACAACCA AACTGCAGGA AGTAGTAGTG
ACAGGTTTCC AGGATATTGA TAAAAGCAAA TTCTCCGGTG CTGCTGCCCG TATTAAAATG
GATGAAGCCA AGATCGATGG TATGGCAGAT GTAAGCCGTA TGCTGGAAGG ACGTGTGGCT
GGTGTGGCGA TACAGAACGT GTCCAGCACT TTTGGTACAG CGCCTAAAAT ACGCGTACGT
GGCGCTACCT CCATCAATGG TGATAACAAA CCACTGTGGG TAGTTGATAA CGTGGTACTG
GAAGATGTAG TGAATATCTC TAACGACCAG CTGTCCAGCG GCGACCCGAC CACATTGCTG
GGTTCTGCTG TAGCAGGTCT GAACCCGAAC GATATTGAAA GCTTCGACAT CCTCAAAGAT
GCGGCAGCTA CCGCATTATA CGGCGCACGT GCGATGAACG GCGTAGTGGT GATCACTACC
AAGAAAGGAC GTTCCGGTTT AAAACCTGTC GTTACCTACA GTGGTAATTA CAGCACTCAG
CTGAAGCCTA ACTATAACAA CTATAATATC ATGAACTCCG CCCAGCAGAT GTCAGTACTG
GCAGAGCTGG AGCGGAAGGG CATGCTCACT TCCGATATAC TTTCCCGTGG CGATATCGGC
GTATACGGTA AGATGTATGA AATGCTGAAC GCAGATGATA AAGGTAATTT CCCACTGGAA
AATACGCCCG CTGCAAAACG CAAATTCCTG GAACGTTACG CTTCGGCTAA TACTGATTGG
TTTGATATCC TGTTTAAGAC AAGCTTCATA CAGGAACATT CCCTGAGTAT CTCTAACGGT
AATGACAAGG GTCAGTCCTA TTTCTCTACC AGCTTTTATC ATGACAACGG CTGGACCATT
GCAGATAAAG TAAGCCGTTA TACGCTGAAC TTCCGTAATA ACTACAAGAT CTCTGAAAAA
GTGAGCACCG GTTTCTCTGT ACTGGGTTCT GCCCGTCAGC AAAGAGCGCC GGGTGCACTG
TCCCGTACCA GTAACCCTGT AGAAGGGCAA TACGATCGCG ATTTTGACAT TAATCCGTTC
AGTTATGCCC TTAACACCAG CCGTACCCTG ACAGCCTATG ATCAGGACGG AAAACTCGAA
TATTTCAGAA GGAATTATGC GCCATTCAAC ATTATTAATG AATCGGCTAA TAACTACCTG
AACCTGAGTA TGATGGACCT GCGTCTTCAG GGTGATGTAT CCTGGAAGGT GACTAAAAAC
CTGCGTTACG AATTTGTAGG CGCGCTTCGT TATGTGAAAT CCTCCCGCGA ACACCAGATC
ACGGAGAACA GTAACATGGC CAACGCTTAT CGTGCAGCGG ACAATGCGAC AATCGCGGAA
AATAACAAAT TCCTTTACCG CGATCCGAAT AATCCGGATG CATTACCGGT GATCGTATTG
CCTTATGGTG GTTTCTATAA CCGTACAGAA GACCAGCTGC TCAACTTCGA TTTCCGTAAT
AGTCTGAATT ATAGCACAAC GATCAATCAA CGTCATAGTA TTACGGCAAT GGTGGGTCAG
CAGGTAAAAT ATGCAGACCG TCAGAATTCA TCCAATACAG GTTACGGCTA CCAGTATAAT
AATGGTGGGG TACCTTTTAC CGACTACCGT ATCCTTAAAC AGACCATAGA GAGCAGCTTC
CCATATTATG GTATGGCCAA GGATTATGAC CGCTTTGCGG CCTTCTTTGC AACCGCTACC
TATGGACTGG ATGGTAAGTA TAACCTGACC GGTACTACCC GCTACGATGG TTCCAACAGA
CTGGGACGCT CCAAGAGCGC CCGCTGGTTA CCAACATGGA GCGTGTCTGG TTCCTGGAAT
ATCGATAAAG AAGATTTCGT ACAGGACCTG GGCTGGGTAG ATTACCTGGC GCTGAGAGGA
AGTTACGGTC TGACGGCAAG TCTTGGCCCC GCTACCAACT CCAATATCGT ATTCCAGACA
GTTAACACGA AAAGAACACA CCTCGATGAA GTAGAATCAG TGATCAAGAT CGCTCACCTT
CAGAATGATG ACCTGACATG GGAAAAACTC TACACGACTA ACATCGGTCT GGATGGTACG
CTCCTCAACA GACGACTGAA CTTCTCCATC GATGCATACC GTCGTAATAG TTTTGACCTG
ATCAGTATCA TCAAAACATC CGGTATCGGT GGTGAAACGT TCAAAGCAGC CAACTACGCA
GATATGAAAT CGAAAGGTAT AGAACTGCTC GTAGGCGGCG ATATCATCAA ACGTAAGAAC
TGGGGATGGA AAACCAGCGT GACCTTCGGT TATAATACCA ATAAGATCAC CAATGCGAAG
AACATCCCGC GCATCTTCGA CCTCGTAGTA GCAGAAGGTG GTAACAAAGA AGGTTATCCT
GTAAGGGGTC TTTTCTCCCT TGAATATAAA GGACTGGATC CGCACACCGG TGCACCACAG
TTTGTTGACC AGCATGGTGG CCTGAGCAAG GATGTATTCC TGCAGGACCT GAACACGGAT
CACCTGGTAT ACCAGGGCCC TGTAGACCCT CCTGTAAATG GTGGTGTAAA TAACACCTTC
CACTATAAGA GTTTGTCACT GAACGTATTT GTGACTTATC AATGGGGCAA CAAGATCAGA
CTCTATCCTG CATTCAAAAC AGCTTACTCC GACCTGGATG CAATGCCAAA AGAATTTTAT
GACCGCTGGA TAATGCCGGG TGATGAGAAG GAAACACAGA CACCTTCTAT CCTGGATGGA
CTCGAGCAGG CGTTCCTGGG TGGTGCTTAT CCTTACAATA ACTATAACTA TTCAACTGCC
AGGGTAGCAA AGGGAGATAT GATCCGCCTG AAAACGGTAT CACTGACCTG GCTGGTACCA
GCACCTGTAT TGAGAAAAAC AGCTTTCAGC AATATCTCAG TAACTGGAGC GGCTATCAAT
CCATGGCTGA TCTATGCTGA CAAAAAGCTG AGAGGACAGG ATCCTGAGTT CTTCAACACA
GGTGGTGTTG CGCAGCCGAT ACAGAAACAA TTTACACTAT CCTTAAAAGC AGGTTTCTAA
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| Protein sequence | MLKKATLSLR LTVLALLILL SQAIAVPANA SGIQDALDKK ISLELKNVLL KEALDQIGNL
AEVSFIYAGN KTIVGNKVDV NAHNEKVSDL LKKLLKPLSL SYTVVYDRVV IRPVEKKMEG
LSVPESERQV APRTQDIRGT VASPKNEALP GVAIIIKGTN RGTTTDEKGF FQLKGVPADA
ILVFNFTGYQ QEEVSVAAYK NGVINIQLKE KTTKLQEVVV TGFQDIDKSK FSGAAARIKM
DEAKIDGMAD VSRMLEGRVA GVAIQNVSST FGTAPKIRVR GATSINGDNK PLWVVDNVVL
EDVVNISNDQ LSSGDPTTLL GSAVAGLNPN DIESFDILKD AAATALYGAR AMNGVVVITT
KKGRSGLKPV VTYSGNYSTQ LKPNYNNYNI MNSAQQMSVL AELERKGMLT SDILSRGDIG
VYGKMYEMLN ADDKGNFPLE NTPAAKRKFL ERYASANTDW FDILFKTSFI QEHSLSISNG
NDKGQSYFST SFYHDNGWTI ADKVSRYTLN FRNNYKISEK VSTGFSVLGS ARQQRAPGAL
SRTSNPVEGQ YDRDFDINPF SYALNTSRTL TAYDQDGKLE YFRRNYAPFN IINESANNYL
NLSMMDLRLQ GDVSWKVTKN LRYEFVGALR YVKSSREHQI TENSNMANAY RAADNATIAE
NNKFLYRDPN NPDALPVIVL PYGGFYNRTE DQLLNFDFRN SLNYSTTINQ RHSITAMVGQ
QVKYADRQNS SNTGYGYQYN NGGVPFTDYR ILKQTIESSF PYYGMAKDYD RFAAFFATAT
YGLDGKYNLT GTTRYDGSNR LGRSKSARWL PTWSVSGSWN IDKEDFVQDL GWVDYLALRG
SYGLTASLGP ATNSNIVFQT VNTKRTHLDE VESVIKIAHL QNDDLTWEKL YTTNIGLDGT
LLNRRLNFSI DAYRRNSFDL ISIIKTSGIG GETFKAANYA DMKSKGIELL VGGDIIKRKN
WGWKTSVTFG YNTNKITNAK NIPRIFDLVV AEGGNKEGYP VRGLFSLEYK GLDPHTGAPQ
FVDQHGGLSK DVFLQDLNTD HLVYQGPVDP PVNGGVNNTF HYKSLSLNVF VTYQWGNKIR
LYPAFKTAYS DLDAMPKEFY DRWIMPGDEK ETQTPSILDG LEQAFLGGAY PYNNYNYSTA
RVAKGDMIRL KTVSLTWLVP APVLRKTAFS NISVTGAAIN PWLIYADKKL RGQDPEFFNT
GGVAQPIQKQ FTLSLKAGF
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