| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2181 |
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| Symbol | |
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| ID | 8358333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2675582 |
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| End bp | 2677381 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964365 |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_003121874 |
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| Protein GI | 256421221 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.609194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACAA ATTGTTACAA TTCTACTCGT GTAAACCTGC TAGAAGCTAT GCAGCGACGA
GTTGGCCTGG TCCTTACTGA TATGAAAAAA TTGTCTGACC ACTGCCTGTT CATGCTCCTT
TTTATAGTGG GTATGGCCTG GCTGCCAGCA AAGGCAAGCT CTCTGCCGGC AGGTAAAACA
GATAAAAGCA GTATCGCCTC AGGTGTAAAA CCTTATACCA AGTCAGCCCA GATCTGGATG
ACCTATGGTT ATACTCCCTC CGGTACAGAT CAGGCTGTGG CCACTGGTGA CAGGATCGAC
TACAGGATCT ACATCCGTAA TACGGGTGAC GAGCCGCTGA CAGGTGTGCG CATTGTGGAT
ACCATTCCGC TGCATACCAC TTTCTTTGGC GCCACCAACG GAGGCGGACT GAATGGTGGT
CTCTCCAATA ATATACTTAC CTATAATAAT GTAACCATCC CTGTAGGCGC TACCATCTAT
GTGAATATCT CCGTGGATGT GGCGGCTAAC CTGACAGGTG TTGACTATAT TAATAATACA
GGTTATGTTG ATCTGGGCGA TGGCGCTGGT CTGCGTCATA CCTTCGGTCC TGGTGCTGAT
AATAATATCA CTGCTCCACT GGGTGGCGAC AGAGGATGGC CTTCTACCAG AACACCGGTA
GATAACGGTA TGAATACTGT TGCCTGGAAA AGCTCTGGTT ATATCGGTAC AGGTCCTGAC
CGTACCATCC AGACCGGCGA CGTGATCACC TACGTAATAC ATGTAAAGAA TACCGGTTCA
CAGACACTGA CCAATATCCT GGTGACTGAC TACGTACCTG TATATACGAA CTTCTACGAC
GGTGATGAAA ACGTAACACC TGATGCCAAT AACCTCTTGT CATGGACTAT TCCTTCACTG
GACCCGGGTC AGACAACTGT CCGCACTTTC CGTGTAAGAG TAGCCACTGA CCTGACTGGT
GCGAAGTCAA TCGATAATAC TGCATATGTA AATAACGGTA ACGGTAAAGG TTCTGTTGCA
ACATTGCCGG CTTTATCAAA TGATCCGAGC CAGCCGGATC CGGGTGGTCT GGGCAAACCT
TCCACTACTA TTCCGATCAA GAGCGTTACT TCATTCGAAA GCTGGAAAAT TGTATTGAAC
AGCAGCGGTG AAACAAGCGT AAACTCCGGA GAAGAACTGT CTTATATCAT ATATGTACGT
AACACGGGTA ACATCACTAT TCCATTATTA CAGGTAAGTG ACCCGGTTCC TGATTTCACT
ACTTTCCAGA GTGCTTCTGA TGGTGGTCTG CACTTCGATG GTTCCAACAC TGTTGTATGG
GCAGTTAACA ACCTGGCAGC TGGCGCAATT GCAACCCTGC ACTTTAAAGT AAAAGTGGGA
GATATTCCGG AAGGTATCGG AAGTATCAAT AACACAGCAA GGGTACAGAT AGGTGGTAAC
TCGGATTCTA CCTCCAAACC AACTTACCAT TGCGATCCGA AAGAAGCAGG TTGTGATAAA
GGTACTGTAA CCAGTATCAA AGCAGTGAAA GGTAAACCAG GTTTGATGAT CTCCAACGTG
GTGACGCCAA ATGGCGATGG TAAGAATGAT TACTTTTTCG TAAGAGGAAT AGATAAATTC
CCTAACACAC AGTTGTTCGT ATTCAACCGT TGGGGAGGAG TTGTATACCA GAGTAAAGAT
TATCAGAATA ACTGGAATGC GACGGGACTA AGCGAAGGGA CCTACTATTA CCGGCTTGAA
CTGAATGACC CTGCCACCGG TGTGACTGTT TATAAGGGTT GGGTAATGAT TATTAGATAA
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| Protein sequence | MRTNCYNSTR VNLLEAMQRR VGLVLTDMKK LSDHCLFMLL FIVGMAWLPA KASSLPAGKT
DKSSIASGVK PYTKSAQIWM TYGYTPSGTD QAVATGDRID YRIYIRNTGD EPLTGVRIVD
TIPLHTTFFG ATNGGGLNGG LSNNILTYNN VTIPVGATIY VNISVDVAAN LTGVDYINNT
GYVDLGDGAG LRHTFGPGAD NNITAPLGGD RGWPSTRTPV DNGMNTVAWK SSGYIGTGPD
RTIQTGDVIT YVIHVKNTGS QTLTNILVTD YVPVYTNFYD GDENVTPDAN NLLSWTIPSL
DPGQTTVRTF RVRVATDLTG AKSIDNTAYV NNGNGKGSVA TLPALSNDPS QPDPGGLGKP
STTIPIKSVT SFESWKIVLN SSGETSVNSG EELSYIIYVR NTGNITIPLL QVSDPVPDFT
TFQSASDGGL HFDGSNTVVW AVNNLAAGAI ATLHFKVKVG DIPEGIGSIN NTARVQIGGN
SDSTSKPTYH CDPKEAGCDK GTVTSIKAVK GKPGLMISNV VTPNGDGKND YFFVRGIDKF
PNTQLFVFNR WGGVVYQSKD YQNNWNATGL SEGTYYYRLE LNDPATGVTV YKGWVMIIR
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