| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2180 |
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| Symbol | |
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| ID | 8358332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2673572 |
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| End bp | 2674240 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964364 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003121873 |
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| Protein GI | 256421220 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.384012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATACTG CAGTCTATAA AATTTTACTT GTAGATGAGG ACCAGGTATT TGTGAGACAG
ACCCGGCAGT TATTGATTAC CCAATCTTAT GATATTTACA CAGCCTCCTC AGAAGAAGAA
GGAATCATCA TCTGTCAGCA ACAACAACCT GACCTTATCA TCTGTGGCGC CCACCTGCGA
GGAACAGGCG GACACCATTT TATTATGGCA CTAAGAAATG ATCCTGGATT TGACCATATT
CCCCTGATCT TCATAAGCGT AAAAGATAAC AAACAGGAGA TGCGTATGGC GATGAACCTC
GGCGCTGACG ACTACCTGGC AAGACCCTTC AGAAAGAGGG ACCTCCTGCT CAGTATCCGC
TCCCGCCTCG GCCGATTCGC TAAATTCAAT CATGTGCACA CGCCGGATGA AACAAGAAGC
GTTTCCCTGG CCAACTCAAC CACTGCGCAA CAGGCACTTT ATCACCGCCT CGGTAAAGCT
GAGAACCGCA TTATAAAAAT GATTGCGGAA GGAAAAAGTA CCAAGCAGAT GGCTGACGAA
CTCAATGTGA GCATCCGTAC GATCGAGAAT CACAGGTACA GAATTGCGGG CAAACTCGGC
ATAGCCGGCC GCAATGCACT CACCGAATTT GTAATAAGGA ATATCATTCA ACAGCAACAA
AAGCAGTGA
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| Protein sequence | MNTAVYKILL VDEDQVFVRQ TRQLLITQSY DIYTASSEEE GIIICQQQQP DLIICGAHLR
GTGGHHFIMA LRNDPGFDHI PLIFISVKDN KQEMRMAMNL GADDYLARPF RKRDLLLSIR
SRLGRFAKFN HVHTPDETRS VSLANSTTAQ QALYHRLGKA ENRIIKMIAE GKSTKQMADE
LNVSIRTIEN HRYRIAGKLG IAGRNALTEF VIRNIIQQQQ KQ
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