| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2177 |
|---|
| Symbol | |
|---|
| ID | 8358329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2670201 |
|---|
| End bp | 2671712 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644964361 |
|---|
| Product | peptidase S10 serine carboxypeptidase |
|---|
| Protein accession | YP_003121870 |
|---|
| Protein GI | 256421217 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGCA AAATCTTACT GCCCCTGCTG CTGGCGGGCG CTATGTTTAC ACAGGCGACT
GCACAGACTT CTGAGGCGCA GATGAAACCC TCACCTTCCC GCTTACTGGC GATTGACTCA
GCTGTAGTTA CCAGGCATGA AGTAACGATC AAAGGGCAGC GTGTGCCTTA TACTGCTACT
GCTGGGAGCA TTCCGATCTG GGATGAAGAA GGGAAGCCAC TGGCAGGAGT ATTTTATACT
TATTATGAGA GAGAGGATGT GAAAGATAAG TCCGGCCGTC CGCTGGTGAT CTCTTTCAAT
GGTGGTCCGG GTACCCCTTC CGTATGGATG GAGATAGGTT ATACCGGTCC GCGTATCCTG
AATATAGATG ACGAAGGGTA TCCGGTGCAG CCGTTTGGTA TGCGCGATAA CCCACAATCT
ATCCTGGATA TTGCCGATAT CGTATACATA GATCCTGTGA ATACAGGCTA TTCCCGTCCG
GTACATAAAG ATGTTCCAGG TAGTAAATTC TATGGGGTGA ATGCTGACAT TAAGTACCTG
GCGGAATGGA TCAATACTTT CGTGACCCGT AAAGGTCGTT GGGCTTCTCC GAAGTTCCTG
ATCGGCGAAA GCTACGGAAC CACCCGTGTA TCCGGGCTGG CGTTAGAGTT GCAGGATGCA
CAGTGGATGT ACCTGAATGG CGTGGTCCTG GTGTCTCCGA CCGAACTGGG TATAGACAGG
AATGGTCCGC TGGATGCGGC TTTAAAGCTG CCTTATTTCA CAGCGACGGC CTGGTATCAT
AAGAAGCTAC CAGCTGATTT GCAGCAGAAA GACCTCAATG AGGTATTGCC GGAAGTAGAG
AATTTTACGA TCAATGAGCT GATCCCTGCA CTGTCAAGAG GCGGTTCTCT GGATGAAGCG
CAACGTAAGA GTATCGGCGC GAGGGTGGCA CGTTATAGTG GTTTGAAAGA AATCGTGGTG
CAGGAAAACA ATCTCGATGT ATCTACCAAT CTTTTCTGGA AGGAACTGCT GCGCGATCAG
GGATATACCG TTGGTCGTCT GGATTCCCGT TACAGGGGTA TTGACAGGCA GACTGGTGGT
ACTCAACCTG ATTATAATGC GGAACTGACT GCATGGTTGC AGGCATTTAC ACCTGCGATC
CAGATCTATC TGCGGGAAGA ACTGAACTAT AAAACGGATC TGAAGTATAA TATGTTTGGT
CCGGTGTTCC CATGGGATTC AAAGGACAAC AAGACCGGTG AAAACCTGCG TCAGGCAATT
GCCCAGAACC CATTCCTGCA CCTGCTGGTA CAATCGGGTT ATTATGATGG CGCCTGTGAT
TACTTCAACG CGAAATATAG CATGTGGCAG CTGGATCCGG GCGGTAAACT GAAAGACAGG
CTGAAATGGG AAGGTTATCG CAGCGGACAT ATGATGTATC TGCGAAAAGA TGATCTGGCT
GCGGCCAATG AAAATCTCCG CAAATTTATC CTTCAGTCGA TACCGGCTAA GGGACAAGCA
GCAAAATACT AA
|
|---|
| Protein sequence | MISKILLPLL LAGAMFTQAT AQTSEAQMKP SPSRLLAIDS AVVTRHEVTI KGQRVPYTAT
AGSIPIWDEE GKPLAGVFYT YYEREDVKDK SGRPLVISFN GGPGTPSVWM EIGYTGPRIL
NIDDEGYPVQ PFGMRDNPQS ILDIADIVYI DPVNTGYSRP VHKDVPGSKF YGVNADIKYL
AEWINTFVTR KGRWASPKFL IGESYGTTRV SGLALELQDA QWMYLNGVVL VSPTELGIDR
NGPLDAALKL PYFTATAWYH KKLPADLQQK DLNEVLPEVE NFTINELIPA LSRGGSLDEA
QRKSIGARVA RYSGLKEIVV QENNLDVSTN LFWKELLRDQ GYTVGRLDSR YRGIDRQTGG
TQPDYNAELT AWLQAFTPAI QIYLREELNY KTDLKYNMFG PVFPWDSKDN KTGENLRQAI
AQNPFLHLLV QSGYYDGACD YFNAKYSMWQ LDPGGKLKDR LKWEGYRSGH MMYLRKDDLA
AANENLRKFI LQSIPAKGQA AKY
|
|---|
| |