| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2169 |
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| Symbol | |
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| ID | 8358321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2653915 |
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| End bp | 2655720 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644964353 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_003121862 |
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| Protein GI | 256421209 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.613998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACAA TCAACGACGT CCACCAACAG TTTGCAGAAT ATTTCCAGAT ACCGGCCTTA
AAGCCGTATG CTTACCTGCT TTCGCGAAAA CTCAGCGAAG GGCATATCTG CCTGCACCTG
AATAAACCGG TGGAGGCTGC TGCCGACCTG CCGGCATTCT GTGAAAATAT GCCCACTGGT
AGCAGAACTT TACAACAGAT TCCACTGGTG GCAAAAGGAG GGAATGACAG TCAGCCTTTT
GTGTTGTACC AGGAGCGGTT GTACCTGCAA CGGTATTTCC GGTATGAGAC CATCTTCCTG
CAACGCATTC ACCAGTTTCT GGCTACGGAA AAGGAAGTAC TGGCCGACAG ACTGAAAATG
CTGGAAACCC ACCGTACTTT TATCAGTAAC CTGTTTGCTG CCGGACCGGC ATTTGTAGCC
GATGGTGGCG ATCCGGCTGA CTGGCAGCTC AGTGCTGCAG TGACGGGTGT ACTGAACAAT
TTTACGATTA TCACCGGTGG TCCCGGTACA GGAAAAACCA CCACGGTGGC TAAAATACTC
GCGATACTCT ATTACCTGGA TCCTTCCCTG AAGGTAGCCC TGGCGGCGCC GACCGGTAAG
GCGGCTGCAC GTATGGCAGA AAGCTTGCGT AATACGCAGT TACCTGTGGA TGACGCCATC
ACCGCACAGT TCCGGAGTCT GGCGCCGAGT ACCATTCACC GCTTACTACG CTCCAGGAAA
GACAGTCCCT ATTTTGTGTA TAACAGGGAG AATCCGCTGA ACTATGACGT GGTAATCCTG
GATGAATGTT CCATGATCGA TGTGGCCCTG TTTGCCAAAT TGCTGGACGC TGTCGGTAAT
GGTACCCGAC TCATATTACT CGGCGATAAA GACCAGCTGG CTTCTGTAGA AGCAGGTAGT
TTGTTTGGTG ATCTCTGTCA GGCACAGGAC GCCCTCAACA TGTTCACTAA AGAACGGCTT
GCGCTGATTA ATTCCTTTAT TCCTGATGAA AGAAGAAAAT TGCCTGACAG TCAGATCAAA
GCAAATGATC CTCATCCTTT GTTTCAGCAT CTAGTTGAGT TACGTCGTAG CCATCGTTTC
AGCGGAGACA AGGGGATCGG TAAATTCAGT AAGGCCATCA TTGCAAACGA TCAGGTGGCC
ATACATGGCT TTCTTGCACC GGGTGCAGAT GAACAGGTCG TAATAGATGA AACCTATTCA
AAGGAGCTGT TTGCGCAATT TGTAGCCGGT TACAGCGCCT TTATTGTGGA AAAGGATGTC
CGCAAAGCAT TACAGCTGCT CAATGACCTG CGTGTCTTAT GTGCGATCAG GGAAGGAGAG
GAAGGCTTGT ACGCTATCAA CAGAAACATA GAAAAGATCC TGCACGATAA ACGTCTGATC
CGTGTGAATG CTGAATTCTA CGAGAACAGA CCTGTGATAT TGACCCGTAA CTACTATGAA
CACGGTCTCT TTAACGGAGA TACCGGTATT ATCCGTACGG ATGAACAGGG TGTGCTGATG
GCCTGGTTTG AAGACAGTAA CGGTGAACTG AAAGCGATCC TGCCAGGATA CCTGACAGAA
GCAGAAACCG TATTTGCTAT GACCATTCAC AAAAGCCAGG GGTCTGAGTT TAAGGAAGTA
ATGGTGATCC TGCCACGCGC AAAAGATGTT CCTATTCTGA CAAGAGAGTT GCTCTATACT
GGTGTAACCA GGGCGAAACA GAAAGTGTAT GTACAGTCAT CAGCAGAGGT CTTGTTACTG
ACTGCAACAC GTTTTGTGGA AAGAGCTTCG GGTATCGGAC AGCGTTTTGC AGACGATCGC
CCCTGA
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| Protein sequence | MHTINDVHQQ FAEYFQIPAL KPYAYLLSRK LSEGHICLHL NKPVEAAADL PAFCENMPTG
SRTLQQIPLV AKGGNDSQPF VLYQERLYLQ RYFRYETIFL QRIHQFLATE KEVLADRLKM
LETHRTFISN LFAAGPAFVA DGGDPADWQL SAAVTGVLNN FTIITGGPGT GKTTTVAKIL
AILYYLDPSL KVALAAPTGK AAARMAESLR NTQLPVDDAI TAQFRSLAPS TIHRLLRSRK
DSPYFVYNRE NPLNYDVVIL DECSMIDVAL FAKLLDAVGN GTRLILLGDK DQLASVEAGS
LFGDLCQAQD ALNMFTKERL ALINSFIPDE RRKLPDSQIK ANDPHPLFQH LVELRRSHRF
SGDKGIGKFS KAIIANDQVA IHGFLAPGAD EQVVIDETYS KELFAQFVAG YSAFIVEKDV
RKALQLLNDL RVLCAIREGE EGLYAINRNI EKILHDKRLI RVNAEFYENR PVILTRNYYE
HGLFNGDTGI IRTDEQGVLM AWFEDSNGEL KAILPGYLTE AETVFAMTIH KSQGSEFKEV
MVILPRAKDV PILTRELLYT GVTRAKQKVY VQSSAEVLLL TATRFVERAS GIGQRFADDR
P
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