Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2168 |
Symbol | |
ID | 8358320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2651642 |
End bp | 2653813 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644964352 |
Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
Protein accession | YP_003121861 |
Protein GI | 256421208 |
COG category | [C] Energy production and conversion |
COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAACAG ATAAAAAAAG TGAACCGCTG AACAGGGTAG ACGGAAGAGC TAAAGTAACT GGTAAGGCAA AATACTTTGC AGAGTTCGAA GTGCCCGGTC TTACTTATTG TGTAATGGTG ACGAGTACAA TTACCCGCGG TACCATCACT ACGATTGATA CAAAAAATGC GGAACGTGCA CCTGGTGTAC TGGCGGTATA TACACACCTG AATATGCCCG CCGTACCTGG TTGGGCCGAT CAGCCAAACA GTAATGCGAA ACTGCCTTCC GGCGGAGAGA AATACCGTAT GCTGGGCAGT AATAAAATAC TCTTTAACGG TCAGCCGATC GCATTGGTGG TAGCCAATAC CCTGGAGCGT GCACAATATG GCGCTTCACT GGTGACAGCT ACCTACAATA AAACCGAACA TCAGACTGAC CTGCTGAAAA ATACACAGAA GGCAGCTATG CCCGGCCGCT TCGGCGATTA TACCCGTGGT GAGCAGAAAG AGGCATATAA AACGGCGCCT GTTACCATTT CAGCTGATTA TACGATCCCT GTAGAGGTAC ACAATCCGAT GGAACTGGCG GGTATACTGG CTATCTGGGA AGGAGAGGAT CAGTTGAAAG TATACGCTAA AACACAAGGA GTAAAGGCTA CACAGCGTAC ACTGGCGGGT GCGTTCAAAA TACCGGAAAA GAATATCCAG GTATACTCCG AATTTGTTGG CGGCGGTTTT GGTATGGGAT TGCGTACCTG GCCACAGGAA GTCGCTGTGG TAGCTGCTGC ACGTCAGCTC AAAAAGCCGG TTAAACTGGT CATGACACGT CAGCAGATGT TCTCATTGGT GGGACATCGC CCTTACACTA TACAACATAT CAGTATGGGT GCGGATAAGG ACGGTCAGTT ACAGGGTATC TACCATGAAG CTACCGCTGA AACGGCGAAT TACGACGACT TTACAGAAGG TACAGTGGCC ATGACAAGGT TCATGTATGG CTGTCCGAAC GTAACCACTA AATACCGCAT CGTGCCGCTG GACAGAGGCG TTCCTATCTG GATGCGTGGT CCTGGTGAGG CAACAGGCGC TTTTGCACTG GAATCAGCCA TCGATGAAAT GGCCTATAAA GTGAATATGG ACCCGCTGGA CTTCCGGGTG AAGAACTTCG CAGCAACCGA TCCGGAAAAG AACAAACCTT TCTCCAGTAA CAATCTGAAA GAAGCATATC AGTTGGGTAG TGAGCAAATC GGCTGGCACA AACGCAACCG GGAACCACGT TCTATGAAGG ACGGAGAATG GCTGGTGGGA TATGGTATGA GTACGGGTGT ATTCGGGGCA CATCGCGGGG AATCTACCTG CCGTGCACAG CTGAATGCAG ACGGCACACT GATCTTACAG AGTGCGACCA GCGATATCGG TCCTGGTACC AGTACGGCAA TGGTACAGAT TGCGCATGAA GTAACCGGAC TACCCATTAA GAAAATACGT TTCGAACTGG GAGACGCTTC GCTGCCACCA TCTGGTAGTC AGGGCGGATC TGCTACCGTA TCATCCGTAG GTTCTGCGGT CTTTGATACC TGTACCGCCC TGAAGGCATT ACTCACAGAA GCGGGTCTTG CATTCGAAGA CGGAACGGTG AAACCGGTAG CGGGTAAGAC AGCCACCATG CAGGAGGTAC TGACAGCACA GCAAAAGACA TTCTTCGAAG TGACCAAATC ATCCAAAGGT GGTGCTGAGC AGGATAAATA CTCTATGTAT TCTTTCTCTA TCCATTTTGC AGAAGTAAGG GTACATCCGC ATACAGGTGT CGTGCGTGTA AAGCGAGTGG TGACAGTCGC AGACTCCGGC AGGATCGTCA GTCCGAAAAC TGCTGCCAGT CAGATGATCG GTGGTGTAAC CGGAGGTATC GGTATGGCGC TGACAGAAGA AGCAGTTATT GATCACCGCT ATGGCCGTTT TGTAAACAAC AACCTGGGTG ATTATCACGT ACCGGTAAGT GCCGACGTAC CACATATTGA AACGATTTTT ATTGACAAAC CCGACCCATA TAGTAATCCG ATGGGTTCCA AGGGGATGGG AGAAATTGCA CTGATAGGAT TTTCCGCTGC TGTGGCAAAT GCGGTGTATC ATGCTACCGG AAAGCGTATC CGGGAGTTGC CGATCACGCC TGATAAGATA TTGTCTGCCT GA
|
Protein sequence | MGTDKKSEPL NRVDGRAKVT GKAKYFAEFE VPGLTYCVMV TSTITRGTIT TIDTKNAERA PGVLAVYTHL NMPAVPGWAD QPNSNAKLPS GGEKYRMLGS NKILFNGQPI ALVVANTLER AQYGASLVTA TYNKTEHQTD LLKNTQKAAM PGRFGDYTRG EQKEAYKTAP VTISADYTIP VEVHNPMELA GILAIWEGED QLKVYAKTQG VKATQRTLAG AFKIPEKNIQ VYSEFVGGGF GMGLRTWPQE VAVVAAARQL KKPVKLVMTR QQMFSLVGHR PYTIQHISMG ADKDGQLQGI YHEATAETAN YDDFTEGTVA MTRFMYGCPN VTTKYRIVPL DRGVPIWMRG PGEATGAFAL ESAIDEMAYK VNMDPLDFRV KNFAATDPEK NKPFSSNNLK EAYQLGSEQI GWHKRNREPR SMKDGEWLVG YGMSTGVFGA HRGESTCRAQ LNADGTLILQ SATSDIGPGT STAMVQIAHE VTGLPIKKIR FELGDASLPP SGSQGGSATV SSVGSAVFDT CTALKALLTE AGLAFEDGTV KPVAGKTATM QEVLTAQQKT FFEVTKSSKG GAEQDKYSMY SFSIHFAEVR VHPHTGVVRV KRVVTVADSG RIVSPKTAAS QMIGGVTGGI GMALTEEAVI DHRYGRFVNN NLGDYHVPVS ADVPHIETIF IDKPDPYSNP MGSKGMGEIA LIGFSAAVAN AVYHATGKRI RELPITPDKI LSA
|
| |