Gene Cpin_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2168 
Symbol 
ID8358320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2651642 
End bp2653813 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content50% 
IMG OID644964352 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding 
Protein accessionYP_003121861 
Protein GI256421208 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACAG ATAAAAAAAG TGAACCGCTG AACAGGGTAG ACGGAAGAGC TAAAGTAACT 
GGTAAGGCAA AATACTTTGC AGAGTTCGAA GTGCCCGGTC TTACTTATTG TGTAATGGTG
ACGAGTACAA TTACCCGCGG TACCATCACT ACGATTGATA CAAAAAATGC GGAACGTGCA
CCTGGTGTAC TGGCGGTATA TACACACCTG AATATGCCCG CCGTACCTGG TTGGGCCGAT
CAGCCAAACA GTAATGCGAA ACTGCCTTCC GGCGGAGAGA AATACCGTAT GCTGGGCAGT
AATAAAATAC TCTTTAACGG TCAGCCGATC GCATTGGTGG TAGCCAATAC CCTGGAGCGT
GCACAATATG GCGCTTCACT GGTGACAGCT ACCTACAATA AAACCGAACA TCAGACTGAC
CTGCTGAAAA ATACACAGAA GGCAGCTATG CCCGGCCGCT TCGGCGATTA TACCCGTGGT
GAGCAGAAAG AGGCATATAA AACGGCGCCT GTTACCATTT CAGCTGATTA TACGATCCCT
GTAGAGGTAC ACAATCCGAT GGAACTGGCG GGTATACTGG CTATCTGGGA AGGAGAGGAT
CAGTTGAAAG TATACGCTAA AACACAAGGA GTAAAGGCTA CACAGCGTAC ACTGGCGGGT
GCGTTCAAAA TACCGGAAAA GAATATCCAG GTATACTCCG AATTTGTTGG CGGCGGTTTT
GGTATGGGAT TGCGTACCTG GCCACAGGAA GTCGCTGTGG TAGCTGCTGC ACGTCAGCTC
AAAAAGCCGG TTAAACTGGT CATGACACGT CAGCAGATGT TCTCATTGGT GGGACATCGC
CCTTACACTA TACAACATAT CAGTATGGGT GCGGATAAGG ACGGTCAGTT ACAGGGTATC
TACCATGAAG CTACCGCTGA AACGGCGAAT TACGACGACT TTACAGAAGG TACAGTGGCC
ATGACAAGGT TCATGTATGG CTGTCCGAAC GTAACCACTA AATACCGCAT CGTGCCGCTG
GACAGAGGCG TTCCTATCTG GATGCGTGGT CCTGGTGAGG CAACAGGCGC TTTTGCACTG
GAATCAGCCA TCGATGAAAT GGCCTATAAA GTGAATATGG ACCCGCTGGA CTTCCGGGTG
AAGAACTTCG CAGCAACCGA TCCGGAAAAG AACAAACCTT TCTCCAGTAA CAATCTGAAA
GAAGCATATC AGTTGGGTAG TGAGCAAATC GGCTGGCACA AACGCAACCG GGAACCACGT
TCTATGAAGG ACGGAGAATG GCTGGTGGGA TATGGTATGA GTACGGGTGT ATTCGGGGCA
CATCGCGGGG AATCTACCTG CCGTGCACAG CTGAATGCAG ACGGCACACT GATCTTACAG
AGTGCGACCA GCGATATCGG TCCTGGTACC AGTACGGCAA TGGTACAGAT TGCGCATGAA
GTAACCGGAC TACCCATTAA GAAAATACGT TTCGAACTGG GAGACGCTTC GCTGCCACCA
TCTGGTAGTC AGGGCGGATC TGCTACCGTA TCATCCGTAG GTTCTGCGGT CTTTGATACC
TGTACCGCCC TGAAGGCATT ACTCACAGAA GCGGGTCTTG CATTCGAAGA CGGAACGGTG
AAACCGGTAG CGGGTAAGAC AGCCACCATG CAGGAGGTAC TGACAGCACA GCAAAAGACA
TTCTTCGAAG TGACCAAATC ATCCAAAGGT GGTGCTGAGC AGGATAAATA CTCTATGTAT
TCTTTCTCTA TCCATTTTGC AGAAGTAAGG GTACATCCGC ATACAGGTGT CGTGCGTGTA
AAGCGAGTGG TGACAGTCGC AGACTCCGGC AGGATCGTCA GTCCGAAAAC TGCTGCCAGT
CAGATGATCG GTGGTGTAAC CGGAGGTATC GGTATGGCGC TGACAGAAGA AGCAGTTATT
GATCACCGCT ATGGCCGTTT TGTAAACAAC AACCTGGGTG ATTATCACGT ACCGGTAAGT
GCCGACGTAC CACATATTGA AACGATTTTT ATTGACAAAC CCGACCCATA TAGTAATCCG
ATGGGTTCCA AGGGGATGGG AGAAATTGCA CTGATAGGAT TTTCCGCTGC TGTGGCAAAT
GCGGTGTATC ATGCTACCGG AAAGCGTATC CGGGAGTTGC CGATCACGCC TGATAAGATA
TTGTCTGCCT GA
 
Protein sequence
MGTDKKSEPL NRVDGRAKVT GKAKYFAEFE VPGLTYCVMV TSTITRGTIT TIDTKNAERA 
PGVLAVYTHL NMPAVPGWAD QPNSNAKLPS GGEKYRMLGS NKILFNGQPI ALVVANTLER
AQYGASLVTA TYNKTEHQTD LLKNTQKAAM PGRFGDYTRG EQKEAYKTAP VTISADYTIP
VEVHNPMELA GILAIWEGED QLKVYAKTQG VKATQRTLAG AFKIPEKNIQ VYSEFVGGGF
GMGLRTWPQE VAVVAAARQL KKPVKLVMTR QQMFSLVGHR PYTIQHISMG ADKDGQLQGI
YHEATAETAN YDDFTEGTVA MTRFMYGCPN VTTKYRIVPL DRGVPIWMRG PGEATGAFAL
ESAIDEMAYK VNMDPLDFRV KNFAATDPEK NKPFSSNNLK EAYQLGSEQI GWHKRNREPR
SMKDGEWLVG YGMSTGVFGA HRGESTCRAQ LNADGTLILQ SATSDIGPGT STAMVQIAHE
VTGLPIKKIR FELGDASLPP SGSQGGSATV SSVGSAVFDT CTALKALLTE AGLAFEDGTV
KPVAGKTATM QEVLTAQQKT FFEVTKSSKG GAEQDKYSMY SFSIHFAEVR VHPHTGVVRV
KRVVTVADSG RIVSPKTAAS QMIGGVTGGI GMALTEEAVI DHRYGRFVNN NLGDYHVPVS
ADVPHIETIF IDKPDPYSNP MGSKGMGEIA LIGFSAAVAN AVYHATGKRI RELPITPDKI
LSA