Gene Cpin_2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2166 
Symbol 
ID8358318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2650011 
End bp2650637 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content51% 
IMG OID644964350 
Product(2Fe-2S)-binding domain protein 
Protein accessionYP_003121859 
Protein GI256421206 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC AACTCAGGAA TGAAGAGCAG AACGGTACTT CCCGGCGCTC TTTCCTTAAA 
CAAACCTCTT TGATGACAGC GTTGGCGCTT GCGCCTGAAA CGGTGCTCAA AGCTGCTGAA
AACGGCCTTG ATGAAAAGAT CGCGGCTGCC ATTGAGACAA TGCCGCTGAA TGTGGTCATC
AATGGGGTGA AGCAAAGTGT CAGGATAGAA CCGCGTGTTA CCCTGCTGGA TCTGTTGCGC
GAACGATTGC AACTGACAGG TACAAAGAAA GGTTGTGACC ACGGACAGTG TGGCGCCTGT
ACCGTCCACA TCGATGGAGA ACGTGTGAAT GCCTGTCTGA CACTGGCACT CACGACAGAA
GGCCGTGAGG TGACTACCAT CGAAGGGCTG GCAGACGGAG ATAACCTGCA CCCTATGCAG
GAAGCATTCC TGGAGCATGA TGGTTTCCAG TGTGGTTACT GTACGCCTGG ACAAATCATG
TCAGCAATCT GTTGTATCAG GGAAGGACAC GCTGGTACGC CCGATGAAGT GAGAGAATAT
ATGAGTGGAA ATATCTGTCG TTGTGGTGCT TATTCCAATA TCGTCGATGC GATCATGGAC
GTAAAACAGG GAGGGAAGAA GATATGA
 
Protein sequence
MDDQLRNEEQ NGTSRRSFLK QTSLMTALAL APETVLKAAE NGLDEKIAAA IETMPLNVVI 
NGVKQSVRIE PRVTLLDLLR ERLQLTGTKK GCDHGQCGAC TVHIDGERVN ACLTLALTTE
GREVTTIEGL ADGDNLHPMQ EAFLEHDGFQ CGYCTPGQIM SAICCIREGH AGTPDEVREY
MSGNICRCGA YSNIVDAIMD VKQGGKKI