| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2161 |
|---|
| Symbol | |
|---|
| ID | 8358313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2644187 |
|---|
| End bp | 2645086 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644964345 |
|---|
| Product | diacylglycerol kinase catalytic region |
|---|
| Protein accession | YP_003121854 |
|---|
| Protein GI | 256421201 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.645213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTATGA AAGCGCATTT ACTGCATAAC CCCAAAGCTG GTGACCAGGA ACATTCAGAA
GCTGCACTGA TGAAGAAGAT CAGTGACCAG CAGATCAAGT GTACATACTC ATCTGCCAAA
AAGAACTGGT GCAGGGAAAT CTCTCCTGAT ACTGATTTTG TGATCATCGC CGGTGGGGAT
GGTACAATCA GGAAAGTCAT TCTTGAATTT CTTAGCGGCA AAGCAGGAGA GAGGCGTTAT
CCGCTGGCAC TATTACCCAT GGGCACTGCC AATAATATCA GCCGTTCCCT GCATGTCACC
GGTGAAGAAG AAGACATTAT CGCCTCCTGG CATAAACATC ATATACAGCC ATTTGATATA
GGTACCATTG CCGGCTTTCA TGAAGAGATG TTCTTCCTGG AAAGTTTTGG GTTTGGTATT
TTTCCGGTGT TGATGGAAGC TATGAAGCAA TTGGAAGAAC CTGATGAACC GGAAGAAAAG
ATCAAACTGG CGCTTGTAAT GCTGCATGAT ATTATCGATA ACTACCATGC ACAGGAATGT
AAGTTGGAGA TTGACGGAGT GGATTACTCG GGGCATTACC TGATGGCTGA AATTATGAAC
ATACGCTCTA TTGGCCCGGG ACTAAATCTC AACGGAGACG CGAATGTAGG GGACGGAGAA
ATGGAGATTG TGCTGTTAGG AGAAGATAAA AGAAAGTCAT TCTCTGCCTA TATCAAAGAC
CGTATTGCTT CCTCAGCGCA TAAGGACTAT GACCTCCCGG TGATCAAAGG GAAAAATATC
CGTATTTCCT GGGGGGATGA ACATGCGCAC ATTGATGACG AACTGATACG TTCCCGGGAT
GGTAAAAGCT ACATTGTCAG CATTTTGAAG CGGGAGCTGG AGTTTTTAGT GCCAGCCTGA
|
|---|
| Protein sequence | MCMKAHLLHN PKAGDQEHSE AALMKKISDQ QIKCTYSSAK KNWCREISPD TDFVIIAGGD
GTIRKVILEF LSGKAGERRY PLALLPMGTA NNISRSLHVT GEEEDIIASW HKHHIQPFDI
GTIAGFHEEM FFLESFGFGI FPVLMEAMKQ LEEPDEPEEK IKLALVMLHD IIDNYHAQEC
KLEIDGVDYS GHYLMAEIMN IRSIGPGLNL NGDANVGDGE MEIVLLGEDK RKSFSAYIKD
RIASSAHKDY DLPVIKGKNI RISWGDEHAH IDDELIRSRD GKSYIVSILK RELEFLVPA
|
|---|
| |