| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2160 |
|---|
| Symbol | |
|---|
| ID | 8358312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2643398 |
|---|
| End bp | 2644132 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644964344 |
|---|
| Product | stationary-phase survival protein SurE |
|---|
| Protein accession | YP_003121853 |
|---|
| Protein GI | 256421200 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATAC TAATCACAAA CGACGACGGC ATTTACAGTC CGGGCATAGC AGCGCTGGCC
AGAATAGCGG CCCGGTTCGG AGAGGTAAGG ATAGTTGCCC CGGATGTGGA ACAGTCTTCC
ATGGGACATG CGGTAACGCA TTCCCGGCCG CTTTCCTTCA AAGCCTCTCC TATTAATTTC
GAGGGGATTG AAGCATATCG TGTAAATGGC ACCCCGGCAG ACTGTGTCGC CCTGGGAACA
CATCTGTACA CCAAGACAGA CGTGGTATTG TCGGGCATCA ATATGGGGCC CAACCTGGGC
AATGGTATGT GGCATTCCGG CACCCTGGCA GCGGCTAAAC AGGCTGTACT GTTAGGTATT
AAAGGCATAG CCCTGAGTAC GCCTGTGGGC AAATCTGAGC CTGATTTTGC CGCTTTTGAG
GATTATGTGG CACAAGTACT GGAATTGTTG CTGGAAAAGC CCGGACTAAG CCTTTTCAAT
GTTAATTTCC CTCCTCACCC CAAGGGCATC CGCTGGACGA GACAATCCGT ACGTTTATAT
GATGGTAAGA TCGTTCCCGG CACTGACCCG ATGAACCGCA AGCATTACTG GTTCACCGTC
ACACCACTGG AACCAGCAGA AGAGGGTACC GACAGGTGGG CAGTAGAAAA TGATTTTGTC
TCCATTACCC CATTACGCCT GGATCTGACA AATGAAGCGG AATTACAGGC GGCACTGAAT
AGTCAGTCAT TGTAA
|
|---|
| Protein sequence | MRILITNDDG IYSPGIAALA RIAARFGEVR IVAPDVEQSS MGHAVTHSRP LSFKASPINF
EGIEAYRVNG TPADCVALGT HLYTKTDVVL SGINMGPNLG NGMWHSGTLA AAKQAVLLGI
KGIALSTPVG KSEPDFAAFE DYVAQVLELL LEKPGLSLFN VNFPPHPKGI RWTRQSVRLY
DGKIVPGTDP MNRKHYWFTV TPLEPAEEGT DRWAVENDFV SITPLRLDLT NEAELQAALN
SQSL
|
|---|
| |