Gene Cpin_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2159 
Symbol 
ID8358311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2641090 
End bp2643321 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content47% 
IMG OID644964343 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding 
Protein accessionYP_003121852 
Protein GI256421199 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACG AAACTACATA TATAGGCCGG CCGATGAACC GGGTAGATGG ATATGCAAAA 
GTAACCGGTG ATGCGAAATA TGCTGCAGAC TATCATGCCA AAGGGCTATG CTATGGTGTG
GTGGTTTCGG CTGGCATTGC CAGGGGACGT ATCGTAGATA TTGATACATC AGCCGCGCTG
CAACTGGAAG GTGTGCTTCA GGTATTTACG CATCAGAATG TCTCCGGACT CGCCTGGTTC
AACCGCAGTT ATAAAGACAT GGATGCACCG CCAGGTAAGC ATTTCCGTTA TCTGCAAACG
GATATGGTCG CGTATAGTCA GCAACCGGTG GCGCTTGTCG TTGCGGAAAC ATTTGAACTG
GCCAGGTATG CTGCAACGCT TGTAAATATC AGCTACGAAG CGGATGCTCA TACCACCAGT
CTGACCGGAA ATCTGGATAA GGCAAGACCT CCTAAAGGAA AAAAGACCGG CTTTAAGAAA
CCGGCTAACA GGGGCCATTT TGATAAAGCA TTTAAAGAGG CGCCTGTGCG TGCTGAAGCA
ACCTATTATC AGGGGGCAGA ACACCACAAT CCCATGGAGA TGCATGCTAC TACGGTACTT
TATTACAAAA ATGGTAGTAT CACCGTATAT GATAAAACCC AGGGCGTTCT GAATACACAA
AGCTATGTCA AAAGCGTATT CGGACTTTCC GGTAAAAAAG TAAAAGCTTT ATCTCCTTTT
GTAGGTGGCG CGTTTGGTTC AGGATTGAGG CCGCAGTACC AACTGTTTAT GGCTGTACTG
GCAGCCCTGG AACTGAAACG TTCGGTGAAA GTGATGCTGA CCAGACAACA GATGTTTTCT
CTGGGATTCA GACCTATTAC ACAGCAGACA TTATCTATCG GAGCAGTGGA AGATGGGTCC
CTGCAAGCCA TTAGTCATCA GGCTGTATCA GGTACTTCGC AGTTTGAAGA CTATGTGGAA
AACATCGTCA ACTGGTCGGG TATGTTGTAC CATTGCAAAA ATGTGCAGCA GGATTACAAA
CTGGTGAGTC TCGATACATA TACACCACTG GATATGCGTG CCCCCGGAGC GGTGACCGGT
GTATTCGGAC TGGAATGTGC AATGGATGAA CTCGCATATA AACTGAATAT GGATCCACTT
GAGCTCCGGC GTATCAACTA TAGTGTAGAA GACGGATCTA TGAAAAAGCC ATATTCCAGT
AAAGGTTTGA TGGATTGCTA TGAACAGGCC GCTGCCAGAT TTGGCTGGTC GCAACGGAAT
CCGGCGCCAA GGTCTATGAA GACCGGGCGC CTGTTAACCG GCTGGGGAAT GGCCACCGGT
ATGTGGGATG CAATGACTGT ACCGGCACGT GCCAAAGCTA CTTTTACTGC GGATGGAAAA
CTAACAGTAG GTAGTGCTAC TGCAGATATA GGTACGGGTA CATATACCAT CATGACACAG
ATCGCTGCGG AAACCCTCGG GCTTCCGATC GATAATGTGA CTTTTCAGCT GGGGGATGCT
TCTTTGCCTT TTGCTTACCT CGAAGGTGGC TCCGCTACGG CAGCTTCTGT CGGTACTGCT
GTGCAGAAAG CATGTTTGCA GATACGAGAG CGTTTATTGT CACTGGCTAA AGATATTCCT
GATTCTCCCT TTAGGGAGCT GTCCATAGAG CAACTCACTT TCGCAGATGG AAAGATGTAT
ATGATTGAAA CACCAGCCAA TTTTATTCAT CTGAAAGATA TCATGACCCT GACGGAGACA
GATGCGGTCA ATGTGACCTC TACACCACTT CCCAATATCT TCAAACAGAT GAAATATGCG
AAAAATACGC ATTCAGCTGT TTTTGTCGAA GTGCAGGTGG ATGAGGAACT GGGATTGGTA
AAAGTAAGCA GGGTAGTAAG TGCGATAGCC GCTGGCCGGA TATTGAATCC TAAAACAGCC
AGGAGCCAGA TCATGGGCGG AATTGTATGG GGAATATCGG GTGCTTTGTA TGAAGAGTCT
GTGATGGATC ATCAGTTCGG CCGCTTCGTC AATCACAACT ATGCCGAGTA TCACATCCCG
GTAAATCTGG ACATCAACGA TATTGAGGTC ATATTTGTGG AAGAAAACGA CGATGTAGTA
AATCCGCTTG GTGTGAAAGG AGTTGGGGAG ATCGGTCAGG TGGGAGTGGC AGCAGCTGTT
GCCAATGCTA TATTTCATGC GACGGGAAAA AGGATCCGGG ATCTGCCTGT TACACTGGAC
AAGTTATTGT AA
 
Protein sequence
MNNETTYIGR PMNRVDGYAK VTGDAKYAAD YHAKGLCYGV VVSAGIARGR IVDIDTSAAL 
QLEGVLQVFT HQNVSGLAWF NRSYKDMDAP PGKHFRYLQT DMVAYSQQPV ALVVAETFEL
ARYAATLVNI SYEADAHTTS LTGNLDKARP PKGKKTGFKK PANRGHFDKA FKEAPVRAEA
TYYQGAEHHN PMEMHATTVL YYKNGSITVY DKTQGVLNTQ SYVKSVFGLS GKKVKALSPF
VGGAFGSGLR PQYQLFMAVL AALELKRSVK VMLTRQQMFS LGFRPITQQT LSIGAVEDGS
LQAISHQAVS GTSQFEDYVE NIVNWSGMLY HCKNVQQDYK LVSLDTYTPL DMRAPGAVTG
VFGLECAMDE LAYKLNMDPL ELRRINYSVE DGSMKKPYSS KGLMDCYEQA AARFGWSQRN
PAPRSMKTGR LLTGWGMATG MWDAMTVPAR AKATFTADGK LTVGSATADI GTGTYTIMTQ
IAAETLGLPI DNVTFQLGDA SLPFAYLEGG SATAASVGTA VQKACLQIRE RLLSLAKDIP
DSPFRELSIE QLTFADGKMY MIETPANFIH LKDIMTLTET DAVNVTSTPL PNIFKQMKYA
KNTHSAVFVE VQVDEELGLV KVSRVVSAIA AGRILNPKTA RSQIMGGIVW GISGALYEES
VMDHQFGRFV NHNYAEYHIP VNLDINDIEV IFVEENDDVV NPLGVKGVGE IGQVGVAAAV
ANAIFHATGK RIRDLPVTLD KLL