| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2153 |
|---|
| Symbol | |
|---|
| ID | 8358305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2635356 |
|---|
| End bp | 2636378 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644964337 |
|---|
| Product | Alcohol dehydrogenase GroES domain protein |
|---|
| Protein accession | YP_003121846 |
|---|
| Protein GI | 256421193 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0293801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCTA TAGTTTATAA CGGCCCCTGG AATATTCAGT TGGAAGAACG CGAAGAACCA
GCCATCACAC TCCCGGATGA AGTCATTGTT GAAATACGTG CTACAGGTAT CTGTGGCACT
GACCTCAGCA TCATTTCCGG AGAATATAAT GCCAGACAGC AGGTGATCAT CGGCCACGAA
TCAGCCGGCG TAATCGTAGA AAAAGGCAGT GGTGTGGAGA ACTTCAATGT AGGTGATCGT
GTTATCATCG ACCCTACCTA CTATTGTGGT TACTGCGAGA ATTGCCGCAA GGGTTTACGC
AATCACTGCT TCCAGAAATC CAGTACGGAA GCCGGCGTAT CCATCGATGG TACATTTACA
AAGTACTTCA AGACCACCAA ACGCTTCATC TACCCGCTGG GCGACAATGT ACCCTTTGAA
CAGGGCGCTA TGTCAGAGCC GCTTAGTTGT GTGCTCACAG CTGTAAAGAA ACTCGCCGTC
AGCCCTTTCT ACAATGTAGC CATCCTGGGT GGTGGTCCGA TAGGACTACT CTTTTATCTC
GCACTGAAAC AGTACGGTAT ACAGGCGGGT ACTATCTATG AAACTTCTGC TAACAGAACA
AACCTGATCA GCAGTAATGA TATACTCAGT TCAGGATGGT ATCTGTCCGG TCATTTTGCA
CCTCGTAAAC ATCAGTATGA CCTGATTGTT GATACAACAG GCAGCATGCT GGAAAAATCA
ATCGATGCAG TTGCCGACGG TGGAAAGATT GCGCTGATAG GACTGCGTAA CAACCAGCAG
ACTATCAATC CGAGAGAGAT CACGGATCGC AGTATTTCCA TCATCGGTTC CATCGACTCA
CAGGACACCT TTAAACATGC TGTTGACCTG ATCAACAGCC AGGTACTCGG ACTGGAAAAG
ATCATCACAA AAGCCTATGG CATTGATGAA TTCCAGGACG CGGTACTGGA CCTCGGCTGT
AATGTCAGCA AGCGGCAACG CAACAATGAC ATCAGCAGTC TGAAATCAGT TATCAAATTT
TAA
|
|---|
| Protein sequence | MQAIVYNGPW NIQLEEREEP AITLPDEVIV EIRATGICGT DLSIISGEYN ARQQVIIGHE
SAGVIVEKGS GVENFNVGDR VIIDPTYYCG YCENCRKGLR NHCFQKSSTE AGVSIDGTFT
KYFKTTKRFI YPLGDNVPFE QGAMSEPLSC VLTAVKKLAV SPFYNVAILG GGPIGLLFYL
ALKQYGIQAG TIYETSANRT NLISSNDILS SGWYLSGHFA PRKHQYDLIV DTTGSMLEKS
IDAVADGGKI ALIGLRNNQQ TINPREITDR SISIIGSIDS QDTFKHAVDL INSQVLGLEK
IITKAYGIDE FQDAVLDLGC NVSKRQRNND ISSLKSVIKF
|
|---|
| |