| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2140 |
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| Symbol | |
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| ID | 8358292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2622063 |
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| End bp | 2622620 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964324 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003121833 |
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| Protein GI | 256421180 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTACAC CTGAACTTAT CAAAGAAGCC AGAAAAGGCA GTGCTGCCGC CCAGCGATTA
CTGTTTGACC ATTTGTCAGA CAGGATGCTG ATGGTATGTC GCCGTTACGT CAAGAACCAG
CAGGATGCAG AAGAATTATT GCTGGATGGG TTTTATAAGT GTTATGCCGC CCTGCCGGGA
TTGCAATACC AGGGAGAAGC GGCCCTGTTT AGCTGGTTGA AAAGGATCAT GATCAATGAA
TGCCTGATGT TTCTGCGGAG GAAAAACACC TTCGTGATTG TGTCTGAACA TGTAGCAGAA
ACGGTCGCCC TTGAGGAAGA TGTACTGAAC ACGCTTTCAG CGGCAGAGAT TTTTAACCTG
GTGATACAAT TGCCCGCTGG TTACCGGACG GTGTTTAACC TGTATGTCAT AGAAGGGATG
AATCATGGAG AAATCGCAGG GTTGCTGGGT ATAACGGAAG GTACTTCCAA ATCCCAGTTA
AGTAAGGCGA AATCGTTATT ACAAAAAATG CTTACGCAGC AAAATATTGA ATATGTTAAG
CGAAAATCAC AGCAATAG
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| Protein sequence | MITPELIKEA RKGSAAAQRL LFDHLSDRML MVCRRYVKNQ QDAEELLLDG FYKCYAALPG
LQYQGEAALF SWLKRIMINE CLMFLRRKNT FVIVSEHVAE TVALEEDVLN TLSAAEIFNL
VIQLPAGYRT VFNLYVIEGM NHGEIAGLLG ITEGTSKSQL SKAKSLLQKM LTQQNIEYVK
RKSQQ
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