| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2132 |
|---|
| Symbol | |
|---|
| ID | 8358284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2615299 |
|---|
| End bp | 2616045 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644964317 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003121826 |
|---|
| Protein GI | 256421173 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACTA GTCATCAATG GATCTCACAT TTCAGAAAAA ATGCCACACA ACAGCGTATT
GACTGGCAAC TGGCCCCCAC TGTTACAGAA CAGGAACTAT CCCCTATCCT GCGCTCATTT
CAGTCCTGGC AACTGGGTGA AACACCGGAT GGCGGTCCGC TCTTAAAGGC GACCCGCAAA
TATGCCCGGA AAATGAATGA TCCCTCCTAC CTGGAAGCTA TCCGCCTTTT CATCAGCGAA
GAACAAAAAC ACAGTGATAA TCTTGGCACT TATCTCGATC GCATCGGCCA ACCCAGATTA
AAAGCAGATA TATGCGATAC CATTTTCAGA AAAGTAAGGT ATTTCAACAC CAGTATGGAA
ATCTGGACGC TAACGGTATT AGTAGTAGAA AGCATAGCGC AGTTGTTCTA TCAGTCCCTG
AAAGATGCAA CACGCTGTAC ACTGTTAAAA CAGATTTCTA CGGATATTCT CGTCGACGAA
GCACACCATA TCGCATTTCA GCGTGACCGC CTCTTTATGC TCTTTCAGCA CAAATCCTGG
ATTACAAGAT TCGTTTGCCG GCACTTATAT AAACTGTTCT TCGCCGGCAC AGTACTCATC
GCCTGGACAG CCTATAAAAA CGTGTTTATC GCCGGTGGTA ACACCTTCAG CAGTTATCTG
CGAAAAATGA GATACAAGTA CTATAAGAGT ATTCATAATA CAATCAGTCA GAACAAATAC
TATTATTCAA ACAGCGTAAT GGCTTAA
|
|---|
| Protein sequence | MRTSHQWISH FRKNATQQRI DWQLAPTVTE QELSPILRSF QSWQLGETPD GGPLLKATRK
YARKMNDPSY LEAIRLFISE EQKHSDNLGT YLDRIGQPRL KADICDTIFR KVRYFNTSME
IWTLTVLVVE SIAQLFYQSL KDATRCTLLK QISTDILVDE AHHIAFQRDR LFMLFQHKSW
ITRFVCRHLY KLFFAGTVLI AWTAYKNVFI AGGNTFSSYL RKMRYKYYKS IHNTISQNKY
YYSNSVMA
|
|---|
| |