Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2125 |
Symbol | |
ID | 8358277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2606631 |
End bp | 2608106 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964310 |
Product | Ricin B lectin |
Protein accession | YP_003121819 |
Protein GI | 256421166 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA AAATCCCCCT TCTTGCATTT GCAGCTATGC TGCTGTTTGC CTGTAAAAAA GACATTGAAG ACAGCGCAGC CTGTGCTTTA CCTATTCCTT CTACCGCAGC CGTATCAGCA GCAGCCCTGC CTTCTTCAGA TTTTAAAGGC GTTAACTGGG CGGATACCCG GGATAATTTT GCGGATGATG AGCTGGTCTT GTCGGGTACC ACTATCAATG ACAGCTATGC GACTATTCAG ACGAAGGCCG ATTATATACT GAGCGGTTTT CAGACAGCGG GCGCCAATAC CGTGCGGCTG CCTGTCAACC CTCCTACGGT GCTGGGCACC TGGTGGCAGG CATATAAAGG CGCTGTTGAC AAAGCCAGCG CTAAAAATAT GAAAGTCTTA CTGGCGTATT GGGAGGGTGC TTCCTCACGC AATGGACTGA TTGATAATAC GACTACTTTC TGGCAGATGT GGGATGCGGT CATCGCTGCT TACCGGTCCA ATCCGCTGAT CTATTTTGAG GTCTTTAATG AGCCGCATGG GTATAGTGCG ACAGACCTGC TGACCTTGTA CAATCAGTTC GTAACAAGGT ATCCGGGTGT GCCTAAGAAC AGGTTTATAC TCGATGGTAC CGGATATTCC ACCGGTGTAA ATACTGTGGG AGCAGATACC CGTTTTGACA GCTGTATGCT TTCTTTCCAT GATTACACCT GGTTTGAAAG CAGTAAAACG ACAACTGCCG ACTGGGAGCA ACCGGTTAAA TCGCTGGCTT ATCCTGGCAG GACGATTGTC ACGGAATTTG GTACCGTGAT GACAGATGGT ACTAATTATA CCGGCGCACC AGGATCAAAT GTGAATAACA CGTATCTGCA GGGAATGACG AATTCGCTAC GCGAACTGGG TGTTGGTTGT GTATACTGGC CCGGTCTGAG AACAGGCGAT ACTTACAGCA TGTTTACCGC TAATGGCACA TCCCTTGCTA CTAATAATAA TTCAGGTTTA ACCCGTTTAA AATATGCCTG GGGAACCGGC ACAATTACGC CTCCTTATGC ATCATTTACA GCAGGCGTTT ATTATAAAGT CATCAATAAA CATAGTGGTA AATCACTGGA AGTATATAAC CAGCTGACTA CTAACGGCGC TACGATTGAT CAGTGGGATT ACTGGGGAGG TAACAGTCAG CAATGGTCAT TTAATGCATT AGGTAATAAT TACTTTTCTA TAATAAACAG AAATAGTGCT AAATCCCTGG ATGTGAATGG TCAATCTACC GTCGCAGGAG CAGCAATTGT GCAATGGGAC TACTGGGCCG GCAACAATCA GCAATGGCAG ATTGTTGATA TAGGTTTTGG TTATTACAAG TTATTAAACA GGAACAGCGG TTTCTCATTG GATGTCAATG GTCAGTCAAC AGCCAACGGA GGTAATGTGA TTCAGTGGAA CTGGAATAGT GGTGCTAATC AGCAATGGCA GATCGCAGCG CCTTGA
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Protein sequence | MKRKIPLLAF AAMLLFACKK DIEDSAACAL PIPSTAAVSA AALPSSDFKG VNWADTRDNF ADDELVLSGT TINDSYATIQ TKADYILSGF QTAGANTVRL PVNPPTVLGT WWQAYKGAVD KASAKNMKVL LAYWEGASSR NGLIDNTTTF WQMWDAVIAA YRSNPLIYFE VFNEPHGYSA TDLLTLYNQF VTRYPGVPKN RFILDGTGYS TGVNTVGADT RFDSCMLSFH DYTWFESSKT TTADWEQPVK SLAYPGRTIV TEFGTVMTDG TNYTGAPGSN VNNTYLQGMT NSLRELGVGC VYWPGLRTGD TYSMFTANGT SLATNNNSGL TRLKYAWGTG TITPPYASFT AGVYYKVINK HSGKSLEVYN QLTTNGATID QWDYWGGNSQ QWSFNALGNN YFSIINRNSA KSLDVNGQST VAGAAIVQWD YWAGNNQQWQ IVDIGFGYYK LLNRNSGFSL DVNGQSTANG GNVIQWNWNS GANQQWQIAA P
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