| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2115 |
|---|
| Symbol | |
|---|
| ID | 8358267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2592190 |
|---|
| End bp | 2594976 |
|---|
| Gene Length | 2787 bp |
|---|
| Protein Length | 928 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644964300 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003121809 |
|---|
| Protein GI | 256421156 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAG AATTAGCTTT ATTCGATATA CTATTAGCGC CTGAACGTTC GGAAACAGAA
CGCCTGGATG CACTAAACAG TCTGCAACCC TTCCTCGCTA CAGACGAAGC CGCAGAAAAA
CTGTCCCTCG CAGCGAGAAA CGAAGCCTCC ACCACCATAC GTGCGCGGAT GCTGGCACTC
CTGTCCGACA TCCCCATCAC CCGTCTTACT CAACGGAGTG CCTATATTGA TACCTTCTGC
TGGTTTGCCT GCCTGGAAAC AGAAAGAGCA CTACGCCTGC AGGCAGTACA TAAACTCGCA
GCACTCGCGT CACACGTAGA CCTCGTACAG GAAATCCTGG CAGAAACACT GGTCAACGAT
CTTGATATCG CCATACAACT GGAATGTATA CTTGGTCTGG GCAACAGCGT ACAAAAAACG
CCTGCTACCA TCCAAAAGAT CAGCGCATTC ATTCCACTGG CGCCCACAAA AACCAAATAC
AGCTTGTTGC AGCTGGTAAA ACAGTTTCCG ATGGAATCAG CAGCAGAACT GGTATTACAG
TTCCTGTCCC CACTGGAAAG CAGCAGTACC AGACTGGATG CCATCAGTTT CCTCGCATCG
CTGCCAGCTC CTTCTCCGGC AGTGATCAGT ACCCTGTCTA CACAGTTCCT TGAGGAGAAT
GACTTACATG TACGTACCGC GATTATTCAA TTGCTCGCCG GACTGAAGAC CGCAGACCAG
TCATTGTTTC CTGGTGTCCT CGCGGCATTA CAACGTATGC CCGATCAACC GGAATTACTG
GCTATACTGA AAGACAGGTT GACAGCACAC CCGGAACTGG CAGAACAACT GTCTCAGTTG
TTTGCAGACA GTCAGTCCGC CGGACTGAAA ATCAGCCTGC TCTCCTTACT CCGCCATAGC
GAAATACCTG CCCTGCTGAT AAAAGGCTTA CAGGATACCA ATCCCTATGT CAGAGAAGCC
GCCATTCCTT ATCTGCAACA ACATTTTGTT CGCTACCAGG ACACCATCGA ACCGGCATTG
ATAGCTGCTA TCAATAAAGA ACCACTTACC GTATTACGTA GTGCACTGAT ATCCGTACTG
CTACACACCG GTCGTAAATC GCCTGCCACA GAAGCAGCGT TGATATCGCT GGCATTAGCA
GAAACCGAAC ATCACTTAAA AATACAACTG GCCGAAGCCG CCACGCAGAT CCCTGTTACA
GAAGAAAACA AGGCACTCTT ACTGCAACTC TTCAGAGAGA TCTTGGAAGG TGTCTACTTC
CCTCCTGCTA TCAAACACAT GGTAACAGAA CGCCTGCGTA CCTTCTCCTA CAGCGATTCT
CCCGATCTTA AACGCAGTCT GGGACTGATG CTCGAACAGG CAAAAAGCAT CTCAGAAGTC
GCCAGTATTT ATGGCTTATT AAAAACACTG GAAACAGATA TTCACCAACT GGCGCCGACA
ATGATCAATG TACTTTACCG GCACATTGCA TTTTATCCAC AGGCGCCCCT GGACGAATGG
GTACAGACAC TCGGAATACT ATCCGCTCAG GATGCAACAA TAAGGGCCGA ACTGCCTTAT
ATCGTTTCGC TGACCAAAGC CAACTGGCTG CTGTCAGAAA CAGAAAAGGC AGATCAGACA
GGCGCTTTCC TGCCTGCATT CAAAGAGACG CTGTTGAAGA AGAATGGTAT GCAAACCTTC
ATGGAAGCAG AAAGAATGCT GAATGAAGCC TGGCAGAACA GAACGATCAA AAAGACAGAG
GTCATTGCAT TGTATAAGAT GTTGTTAAGT CTTCCAAAGA CGGACGGCAT TCTCCAGCGA
CTGCTGAATA TTATGCAGAC AGGTAAACTG GTTACGCCCG AACTGGTACA GATCAGCCTT
GATTACCTGC TGACCTCCAT CGACAAAGAC GGCACTTACA TGGTCAGAAA ATACCTGGAA
AGCACCGGCT TTATGGACCT GGAATACCGT GACAGGGTAA TTGCATTATT CACGCAAGAC
AACTTCCGTC GTTACATGCA ACACAACCTG TCTACCCTTC ATTCCAAAAA GCGGTACAGC
ACCATCAATG ACTGGGAATA CAGCGGCTGG TACAGCGCAT ACAACGACTG GCCGATAGCG
GAACTCGTAT TCGCAATGGA ACCCGGACAA TTGATTACAC AACTGTTCTC TACGTCTCCT
TCAGCAAGCG ATGCACCTGA AGCAACACTG CAATACCTTG TGCTGGAACA CCTTTTTAGA
AAAGCCAGCA ATACCTGGGC AAAAACAGTA TACAGCAACG CAGAGACATT ACAAGCCTTC
CTGCGGCAGT TAGCTGACAA TATCCGCATC CTGCCGGAAA CAAATGGCCT GCGGGACAGA
ATGGTATACC TCTTCTGGAA AAAATGGAAT GACTACGTAA GACTCATGAA TGGCAACCCC
ATACCGCCTG AATTAGCCCA CGCAGCGGCA GAAGTATATG TGGCAATCTG TAAAGTACAG
CAAAGACTGG AACCAGATTT CTCGGGTAAG AAATTCCCGG ATATACTGAA GGGTATGAAC
AAAGATATCG TTCAGCAGCA ATGGCCCTGG AACAACGAAC TATGGGAGAC CTTTGAATAC
AGACATTTCC CTAAAGCAGA TCCTGATCAG GATGCAGCGC AGCAATTGTA CCAGCAGGCC
GCCAAAGCTT TGCAGTCAGG AGAAATGGGA AAAGGCTATC AGGTATTGAA AGACCTCCTG
GCACATTACA GTCATACAAA ACTGGTAAAA GAGCAACTGA GTAACATCAA TAACGCCCTC
TCCCGTTTAG AAGAACAGTC CAGGTAA
|
|---|
| Protein sequence | MPEELALFDI LLAPERSETE RLDALNSLQP FLATDEAAEK LSLAARNEAS TTIRARMLAL
LSDIPITRLT QRSAYIDTFC WFACLETERA LRLQAVHKLA ALASHVDLVQ EILAETLVND
LDIAIQLECI LGLGNSVQKT PATIQKISAF IPLAPTKTKY SLLQLVKQFP MESAAELVLQ
FLSPLESSST RLDAISFLAS LPAPSPAVIS TLSTQFLEEN DLHVRTAIIQ LLAGLKTADQ
SLFPGVLAAL QRMPDQPELL AILKDRLTAH PELAEQLSQL FADSQSAGLK ISLLSLLRHS
EIPALLIKGL QDTNPYVREA AIPYLQQHFV RYQDTIEPAL IAAINKEPLT VLRSALISVL
LHTGRKSPAT EAALISLALA ETEHHLKIQL AEAATQIPVT EENKALLLQL FREILEGVYF
PPAIKHMVTE RLRTFSYSDS PDLKRSLGLM LEQAKSISEV ASIYGLLKTL ETDIHQLAPT
MINVLYRHIA FYPQAPLDEW VQTLGILSAQ DATIRAELPY IVSLTKANWL LSETEKADQT
GAFLPAFKET LLKKNGMQTF MEAERMLNEA WQNRTIKKTE VIALYKMLLS LPKTDGILQR
LLNIMQTGKL VTPELVQISL DYLLTSIDKD GTYMVRKYLE STGFMDLEYR DRVIALFTQD
NFRRYMQHNL STLHSKKRYS TINDWEYSGW YSAYNDWPIA ELVFAMEPGQ LITQLFSTSP
SASDAPEATL QYLVLEHLFR KASNTWAKTV YSNAETLQAF LRQLADNIRI LPETNGLRDR
MVYLFWKKWN DYVRLMNGNP IPPELAHAAA EVYVAICKVQ QRLEPDFSGK KFPDILKGMN
KDIVQQQWPW NNELWETFEY RHFPKADPDQ DAAQQLYQQA AKALQSGEMG KGYQVLKDLL
AHYSHTKLVK EQLSNINNAL SRLEEQSR
|
|---|
| |