| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2107 |
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| Symbol | |
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| ID | 8358259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2581028 |
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| End bp | 2581636 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644964292 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003121801 |
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| Protein GI | 256421148 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCGGATA AACCATCAAA TATAGAACAG GGGGTGCTGC AACAGATCGC AGAAGGCGAT
GAGGCTTCAT TCAGGGAGCT GTATGCCCGT TATTATCCTC AACTGCGTCC TTTTATCTGG
AAATATACCG GCTCGGCGTT ACAGACAGAA GATATCTTAC AGGAAACGTT TATCAGGATC
TGGCTGAACA GGGACAAATT GCCGGAGATT GAAAATCTCA GTGCCTGGAT CTTTAAAGTC
GCCTCCCGGG AATACCTCAC CCTACTCAGG AAGCAGCTGG TATATGAAGA AAAGCTGGCT
ACGCTGAATA TTAATATGGA TAAGGATGGA GATCTGGCCC CGCTTACGCC GGATGACCAG
GCGCACCTGG CGGATATCAG GCGGGTGATC GGCGAAGCGG TAGCACGGCT GCCAGAACAA
CGCCGCCGTA TTTACCGTAT GAGCCGGGAT GAGGGTATCC GGATACAGGA GATCGCCGAT
ACACTGTCTA TTACTCCACG TACCGTAAAG AACGTATTAA CTACCAGTCT GAAGGAGATC
CGGGAACACC TGGCGGCTTC AGGATATACT TTTATGATCC CTCTCTTTTT GTTCCTCAAA
GATTATTAA
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| Protein sequence | MPDKPSNIEQ GVLQQIAEGD EASFRELYAR YYPQLRPFIW KYTGSALQTE DILQETFIRI
WLNRDKLPEI ENLSAWIFKV ASREYLTLLR KQLVYEEKLA TLNINMDKDG DLAPLTPDDQ
AHLADIRRVI GEAVARLPEQ RRRIYRMSRD EGIRIQEIAD TLSITPRTVK NVLTTSLKEI
REHLAASGYT FMIPLFLFLK DY
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