Gene Cpin_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2100 
Symbol 
ID8358252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2573756 
End bp2574136 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content43% 
IMG OID644964285 
Productprotein of unknown function DUF1696 
Protein accessionYP_003121794 
Protein GI256421141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.320981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTTT TTTCAGGCTT ACTTGGAAAC GCCGGCGCTG TTGATCAGGC GCAACTCGTA 
AAAGATTACG GTAAACTTTT AACTCCTTCA GAAAACATTG AGCTTGGCTT CAAACTGATC
AGGGACACTT TTATTTTCAC CAACAAACGT ATGATCCTGG TTGACAAACA AGGGATCACA
GGTAGCAAAG TAGAATACCT GAGTGTAACC TACAAAAGTA TTTCAAGATT CAGCATCGAA
ACTGCAGGCA CCTTCGACCT GGACGCAGAA CTGAAGATCT GGATCTCCAG CGAAGTACAA
CCAAGCATAC GCAAACAGTT CAATAAGTCT GTAGACGTAT ACGAAGTACA GAAAGTACTG
GCACAGCACG TACTGGGATA A
 
Protein sequence
MGLFSGLLGN AGAVDQAQLV KDYGKLLTPS ENIELGFKLI RDTFIFTNKR MILVDKQGIT 
GSKVEYLSVT YKSISRFSIE TAGTFDLDAE LKIWISSEVQ PSIRKQFNKS VDVYEVQKVL
AQHVLG