| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2097 |
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| Symbol | |
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| ID | 8358249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2568211 |
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| End bp | 2571543 |
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| Gene Length | 3333 bp |
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| Protein Length | 1110 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644964282 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003121791 |
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| Protein GI | 256421138 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.794308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT GTACATCTAG CTTTAACCTC TGTCTGATGC TGCTATTCAG TATGTTTTTT
GTACATGGAA CGTATGCTCA GGGACGAAAA TCAACCGAAA CAACTTTAGT TTCTTTTAGC
GGGGCAAGTA TTCCTTTATC TACGCTTGTC GAGAAGATTG AGAATGAAAC GCAATTTCAT
ATTCTTGGGA TCATTGCGTA TGACAGTATT ATGGTATCAG CCGATCTTGC GGGAAAACCT
TTGTCTTTTG TATTGGATGA GATCAACAGA AAGTATGGTC TTAAATGGGA AGTATATGGT
TGGGATATTC ACCTGACCCA GACTTTCCCA CCTAAAAATG CATCTGCGTC GGGGCAGCAG
TTGATTATAC CTGCGCCCAG ACTGTATCAG TTCAGAGGCA CTGTCTCCGA TAATGATGGT
AAGCCCTTGT TTGAAGCAAC AGTGACCCGC TGTGGGACCA ATAAGAAAAA AATCACAAAT
GAAAAGGGGG CGTTTTCGTT AGATGCAGAA GATTCTGTTA TTACTATAGC CGTGTCTTTC
GTAGGATGTG AGTCGGTGGA GCAAATTATT CATTACAGAC AGAAATACAA TATTGTTTTA
AAACAGGTGA GTACCTCTAT TAAAGAAGTG ATTTGTGATG GCTATTCGAA AGAATCACGT
GAAGCATCTA TGGCGACTAT ATTTACGCTA ACGTCTTCGG AAATAGAAAA ACATCCAGCC
AATAATCTGG CAGATGTACT TAGAGGAAGG GTGCCCGGAT TGAATATTGT TCCCTTGAAT
GGAGTGACGG GATCGTCTTT TAAGTTTGAG TTAAGAGGAA GAAACTCTAT ACTAAATGCA
GGCAGTCCTT TGTTTTTGAT CAATGGTGTT CCCATTGTTA GTGATAACCT CAATCAGTTG
TCAAGTGTCA TTACCAATAA TACAACAGCA GGGGCTGGTC CTTTTATTGT CATAAATGTG
AATGAAATAG AGTCTGTTCA GGTATCCAGA GATGCGATCG CTACAAGTAT TTATGGCAGC
CGTGGAGGGA ACGGAGTGAT TGCCATCTGG CTGAAGTCTG CCGTTCCGGG TGTTTCACGG
ATGGTTGCAA ATGTGAATAC CGGGATAAGT AGTGTGGCTC ATAAGTTCAA TTTGTTATCG
CCAGATCAGT ATATGGATTT GCGTAAGGAG GCTTTTAAGA ATGATGGTAT TACACCGGTG
AATAGTCGCG GAGGAGCGGG TTATGCGCCG GATTTGTTTG ATACGACTGA AAAATATATT
GATTGGCAGA AATTACTGTA TGGTCGCGTA ACATCTGTGA CAGATGCTAA TCTTTCTGTC
TCACATGGTG GAGACCTTGT TTCATCTTAT ATCGGATTTG GATATTGGCG GGAGGGGTCT
GTAATGGACA ATGATATGAA TTTCCAGCGG ATATCCCTTA ATTCTTCATT AAAGTGTTTT
CTGCCAGACA AGCGATTCTC CATTGAGTCG CAATTTTATT TTTCTTCAAA TACAAATAAA
ATATTTAACG GATCCCTGAT GGGCGTTTTG CTTCCCCAGA ATGCTGCCCG GTTTATGGGC
CGGAACAAGG ATCTGAAATG GGCAGAATGG CTGGACTGGT CGAGGAATCC GGATGCAGAC
AGGAAGAAGA CATATAAAAT GAACATCAAC AGTGTCATAT TTAATCTAAG TCCACAGTTC
CTTAGCCATA ATAAAAAACT GCTTGTTAAG ACAAACATTG GTGCGAATGC AAATTTTGTG
AATGAAAGTT CTCTAATACC TTCTGGCGCA ATGATGCCGC TTCCCGCTGA TTCCCTGCCA
GGAAGATCTT TTCTCGCAAA CAGTGTGTCA AATAGTATTA TCGTCGAACC GGTCGTGGAA
TATACCTGGA GATGGTTGAA ATTATTAGCA GGAGGGACTT ATCAGTATTC TAAAACAAGC
GGTGATAGTA GTTCCGGATA TTATTATGAT CATCGTTATG CACCTGCTGA AGGGAGGGCT
CCTTTGATTA CGGATCGCAG TCCTGTAATC CGTGAATATA AATACGGGTC TGTATTTGGT
AAGCTGGATT ATAATTATTC GAATATTTAC TTCTTCAACT TTACCATCAG GAGAGATGGC
AGTAGTCGGT TTGCACCCCA GACCAGATTC GGTAATTTCT GGGCGACTGC TATTGCATGG
AATTTTGCAA AGGAATCATT TTTAAGAATT CCGAAGAAGA CATTGGAGTA CGCGAAGTTA
AGATTTAGCT ATGGCATAAC AGGAAGCGAT CAGATCGGGG ACTACAGGTA TTTACAATTC
TGGCAACCGT CCAAAGCGTC TTTGCCCGAC ACGAAAGGTC TTTCATTAGG ATCGCTGTAT
AATTCCAAGT ACTCATGGGA GCAAAGTGAA AAAATAGAAT TCTCACTGGA TTTTTTGATG
TTTGATGGAA AGTTTTCGGG TAACGTCGCT TATTTTCTAA ACAGAAATAC GAGACAGCTG
GTGGAATACA AGCTTCCCCG CCAGACAGGC TATAAAAGTA TCCTTAAGAA TTTTGATGCT
GAAATCCAGA ATCGTGGAAT CGAGTTGTTC CTTGAGGCCA GGCAGTTGAA GCTAGGCGCT
TTTCAGTTGA GTGCAGGGTT TAATCTGACT GCCGCAAAGA ATACCCTTGG TTCGTTTGAC
GGACTGAGTC AATCGGACTA TTCTTCCAGG TTTATCATAG GGAAGTCACT TAATGCTAAA
AAGTTATATC GTTGGAATGG TGTTGATAAA GCAACCGGCT TTGACAAATT TGATGATATT
AATGGTGATG ATAAGTTAAA CGAAAATGAT CTGATGTATT TTGATCATAC TGATCCAAAG
TATCAGGGAG GGCTGACGCT GAGTGTCAGT TATAAGGGAT GGTCATTTTC TACCTCTTCC
GAATTCAAAA AAGTCTCGGT ACCCAGTTAC ACCTATAATG TCCTGATGGG AGGGGCAAAC
TGGGGTAGTC TTTCCAATCA ACTGGCCGTT GTTGATAAAC GTTGGCGTCA GCCAGGCGAT
GAAGCTGAGT TTTCGAAGGC ATCCGCATTA TCTAACAGTC CTGTGAATTT ATACAGGGCT
AATCTCATTA ATTCCAGTCG TGCTATTACT AACGGCAGCT TTTGGGCACT AAGAGATGTT
AATATATGTT ACACATTCAG AAACCCTGAT CTGGCCATCA GGCACATTGA TAAAATTGAG
TTGTCCTTAA AGGCGCAGAA TTTACTGACC ATTTCGCCAT ACGATGCAGG CGATGCTGAA
ATAGCAAACC TGTATGCTTT GCCTACACTC CGAACTGTCG TTGCAAGCCT TAAAATTTAT
TTTGGTAATC CCTTAAAGAA GAAAATGATA TGA
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| Protein sequence | MKKCTSSFNL CLMLLFSMFF VHGTYAQGRK STETTLVSFS GASIPLSTLV EKIENETQFH
ILGIIAYDSI MVSADLAGKP LSFVLDEINR KYGLKWEVYG WDIHLTQTFP PKNASASGQQ
LIIPAPRLYQ FRGTVSDNDG KPLFEATVTR CGTNKKKITN EKGAFSLDAE DSVITIAVSF
VGCESVEQII HYRQKYNIVL KQVSTSIKEV ICDGYSKESR EASMATIFTL TSSEIEKHPA
NNLADVLRGR VPGLNIVPLN GVTGSSFKFE LRGRNSILNA GSPLFLINGV PIVSDNLNQL
SSVITNNTTA GAGPFIVINV NEIESVQVSR DAIATSIYGS RGGNGVIAIW LKSAVPGVSR
MVANVNTGIS SVAHKFNLLS PDQYMDLRKE AFKNDGITPV NSRGGAGYAP DLFDTTEKYI
DWQKLLYGRV TSVTDANLSV SHGGDLVSSY IGFGYWREGS VMDNDMNFQR ISLNSSLKCF
LPDKRFSIES QFYFSSNTNK IFNGSLMGVL LPQNAARFMG RNKDLKWAEW LDWSRNPDAD
RKKTYKMNIN SVIFNLSPQF LSHNKKLLVK TNIGANANFV NESSLIPSGA MMPLPADSLP
GRSFLANSVS NSIIVEPVVE YTWRWLKLLA GGTYQYSKTS GDSSSGYYYD HRYAPAEGRA
PLITDRSPVI REYKYGSVFG KLDYNYSNIY FFNFTIRRDG SSRFAPQTRF GNFWATAIAW
NFAKESFLRI PKKTLEYAKL RFSYGITGSD QIGDYRYLQF WQPSKASLPD TKGLSLGSLY
NSKYSWEQSE KIEFSLDFLM FDGKFSGNVA YFLNRNTRQL VEYKLPRQTG YKSILKNFDA
EIQNRGIELF LEARQLKLGA FQLSAGFNLT AAKNTLGSFD GLSQSDYSSR FIIGKSLNAK
KLYRWNGVDK ATGFDKFDDI NGDDKLNEND LMYFDHTDPK YQGGLTLSVS YKGWSFSTSS
EFKKVSVPSY TYNVLMGGAN WGSLSNQLAV VDKRWRQPGD EAEFSKASAL SNSPVNLYRA
NLINSSRAIT NGSFWALRDV NICYTFRNPD LAIRHIDKIE LSLKAQNLLT ISPYDAGDAE
IANLYALPTL RTVVASLKIY FGNPLKKKMI
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