Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2091 |
Symbol | |
ID | 8358243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2561794 |
End bp | 2563722 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644964276 |
Product | hypothetical protein |
Protein accession | YP_003121785 |
Protein GI | 256421132 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATA ACAATTCATT CGTAAAAGGG TCATTATTTG AAGAAGATTA CCTGATCAGA ACACTTGGGC CGCTTGGTCA TTCACCTGAA GTTGCCTTAA CAGAATTAGT TTCTAATGCA TGGGATGCAG GAGCAACCAA AGTAGATATA TTTATTCCGG AACATAGTGG AGATTATTTA ACTGTAGCAG ATAATGGAAC AGGGCTGACA CCAGAAGACT TTGAACATCG CTGGATGAAA CTGGGCTATA ACAGATTAAA ACACCAGGGG AAAAACGTCA TATTTCCTCC TGGGGTAGAT GGTAATAGAC TTGCCTATGG TCGAAATGGT GTTGGTAGGC ATGGATTGCT TTGCTTTAAT AATGAATATA CAGTTATCAC TAATGCTGGT GGTAATAAAT CGACATTCAC TGTTACGACT GAAAGCGAAG AGCAACCATT TGTTATTAAA GATAAAAAAG TAGAACAATC CAACTTACAC GGAACAACGT TGAAAGTTCT TGTAAATAAA AATTTGCCAA AATCGGAAAG AATTCTACAA ATAATTTCAG CCCGATTTCT ACATGATCCA AAATTTCTGG TTTCGATCAA TAGGCAATCG GTCCAACTGA ATCAACATAC GGGATTATTA GACACTTCTA TTCTGAAAAT AGATGAAAAG ACTACTTTAA AAGCCCATTT TCTGGATTCA ACACAGAGCG CAAGATCTAC TATCTATCAA GGTATTGCCT TTTGGCAAAG CAATAAATTA GTGGGAGAAC CTTCGTGGTC CCTGGGAGGA GAAATTGTTA TAGATGGAAG GACCAAATTC GCTAAAAGAT ATACGGTAGT TGTAGAGACA AACGATCTCG CTGATTATAT AACTGAGGAT TGGACCGGAT TTAAGAATAA CTCATATATG GATAAGATAT ATGCAGTAGT AATGGAGTAT GTTAACAAAA TGCTTACAAC TGTTGCCGAT GAATATGTTG AGGAAGCAAA ACAACAGGTA AAAGCCAATT TTTCTGAAGA TATCGCACAA TTAACGCCTT TAGGCAAATA TGAGGTTATC GAAGCAATAG AGACTATCAC TTCAGCTCAT CCAACCGCTC GTCCGGAAAC AATATCAATC GCCGTTCAGG CAATTATTAA TTTAGAGAAA ACCCGCTCGG GCAAAGAACT ATTGATAAGA CTTGCCAGTC TTTCAGAGGA CGATTTCATA GGATTAAATG AACTTTTACA AAAGTGGTCA ATTAAAGATG CGCTTATCGT ATTGAATGAA ATAGATAATC GTATTTCATT AATTGAAGCA ATTCGGAAGT TATCATCAGA TCCCGATGTT GATGAATTAC ATGTTTTACA TCCGCTGGTT TCTGGCGCTC GTTGGCTTTT CGGTCCTGAG TTTGAATCTC CTGAGTATTC TTCTAATAGA CAATTACAAA CAGCTGTTGA ACAGGTATTT AAGAAGAAAA TCGATCCGAC AGTATTCCTG AATAATAAAA AAAGACCGGA TATTGTTTTA TTGAAGGACT CAACTGCATC TGTAACAGGT ATAGAGGCTT TTGATAGCGA TTCAGGTTTA GCTACTGTAA ACAAGATTTT AATCATTGAA CTAAAGAGAG GTGGTTTCAA TTTAACCCGT GATGAAAGAA ACCAGGCTCA GGGATATGTT GAAGACTTTA TGAATTGTGG AAGATTAATA GGTGCTCCTT ATATAGAAGC TTTTGTAATT GGACAATCGT TCGCTAAAAA TCTCCAGCCG ATTACCACTG TAAAAAATGC AAATGATGTG GAAATGGGAA AAATTCGTCT TTCTACATTT TCCCAGTTAA TAGATACCGC TGAAAAACGG TTGTTTGGCT TACGAGATAA GCTCAATGAA CGTTATGACG ATATTCCTGG AATCGATCTC TTTAAGGCTC AGGCTACACA AATAGCCCTG AAGTTATGA
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Protein sequence | MSNNNSFVKG SLFEEDYLIR TLGPLGHSPE VALTELVSNA WDAGATKVDI FIPEHSGDYL TVADNGTGLT PEDFEHRWMK LGYNRLKHQG KNVIFPPGVD GNRLAYGRNG VGRHGLLCFN NEYTVITNAG GNKSTFTVTT ESEEQPFVIK DKKVEQSNLH GTTLKVLVNK NLPKSERILQ IISARFLHDP KFLVSINRQS VQLNQHTGLL DTSILKIDEK TTLKAHFLDS TQSARSTIYQ GIAFWQSNKL VGEPSWSLGG EIVIDGRTKF AKRYTVVVET NDLADYITED WTGFKNNSYM DKIYAVVMEY VNKMLTTVAD EYVEEAKQQV KANFSEDIAQ LTPLGKYEVI EAIETITSAH PTARPETISI AVQAIINLEK TRSGKELLIR LASLSEDDFI GLNELLQKWS IKDALIVLNE IDNRISLIEA IRKLSSDPDV DELHVLHPLV SGARWLFGPE FESPEYSSNR QLQTAVEQVF KKKIDPTVFL NNKKRPDIVL LKDSTASVTG IEAFDSDSGL ATVNKILIIE LKRGGFNLTR DERNQAQGYV EDFMNCGRLI GAPYIEAFVI GQSFAKNLQP ITTVKNANDV EMGKIRLSTF SQLIDTAEKR LFGLRDKLNE RYDDIPGIDL FKAQATQIAL KL
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