Gene Cpin_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2087 
Symbol 
ID8358239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2554793 
End bp2556475 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content47% 
IMG OID644964272 
ProductAldehyde dehydrogenase (NAD(+)) 
Protein accessionYP_003121781 
Protein GI256421128 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTATTTG CAGAAAATTG CCCCAACCAG GCATTAAAGT ACAATTATTT CCGGCCCGGG 
AGCCTATTCT GGCCGTTTAA CCAGCTAATT GTCAAGAGAT ACCCTGTTTT TGACAAGGGA
AAGGGGAGTT TTGACCTTGA AAATGCCTTT GCCGGCTTTC ATTTTGTCCA CTTCACACAG
AATGTATTTA TGTCTATGGA GATATCTCCG CAGTTTTGTA CTGTAGGAGG CATAGAAATA
CATTTCATTT ACCTTATAAC AATGAACATG AAACACATAA AGAGCGTCTA TATAAATGGC
AGATTCGCTA CACCCCATGG CAATGAAGTA GCGAGTATTG TAAGTCCGCT GGACGGTGAA
GTGATTGCTC AACTGACGTA TGCAGACGAA ACGGATACAG AAAAGGCAAT ACAGGCGGCA
AGTACAGCTT TGGTAAATTA TGCACAAAGC AGCCTTGCTG AAAGAGCTGA ATACCTGCAA
CGTATCCATG ATGAAATCCT CAAAAGAATT GATGACCTGA TTGATATCAC CATCCTGGAA
TACGGCGCAC CAAAGGAGAG AGCGAAATGG TCCAATATGA TCGCGGCTAC GACTTTCCTT
CACCAGATCG CTGTAATGAA GGATTATCCG TTCAAAAAGA CCGTACATGA ATCTACCGTT
GTAATGGAGC CTATTGGTGT TTCGGCCTTG TTTACTCCGT GGAATTCTAC GGCGGGATCC
ATTGCCGTGA AGGTGGCAGC AGCACTGGCA GCTGGTTGTA CGATCGTTCT TAAACCAAGC
GAGTTCAGTC CCTGGCAGTC TCAGATCATT ATGGAATGTA TTGATATGGC AGGCTTGCCA
CCAGGCGTTG TGAATATGGT CAATGGAAGG GGAGATGTGA TCAGCCGGGC TATTATAGCA
AGTCCGGAGG TGACTAAGAT ATCCTTTACC GGTTCTACCG TAGTGGGAAA AATTCTTGGG
AAGGGGGCTA TCGACACCAT GAAAAGACTG ACGCTCGAAC TGGGAGGTAA GTCGGCGAAT
ATTATCCTGG AAGATGCAGA TCTTGATACC GCGATACCTA TGGCACTACA GGCAGGGTTT
ATGAATAACG GACAGGCATG TATCGCGGGA TCAAGGTTAC TGGTGCCGGT ATCCAGACTG
GAGGAGATAA AAAAGAGGCT TGCTGATGGA GCTACACAGT TTAGGGTGGG AGATCCCTAT
CAAGATGCAA CCAGGATAGG GCCGCTGGCT AGTCAGAAGC AGTATGACCG TATCCAGCAA
TTTATTACCA CAGGGCTTGT GGAAGGAGCG GAGTTATTAT ACGGCGGACC AGGACATCCG
GAAGGCTTTG ACAAAGGCTT TTATGTGAAA CCGACGATTT TTGCAGGTGT AAAAAACGAT
ATGAAGATCG CCAGGGAAGA GATTTTTGGT CCGGTGCTAT CGGTGATTGC TTACCAGGAT
GAAGCGGAAG CTATTGCTAT TGCTAATGAT TCTGATTACG GGCTAATGGC GTATGTCAGC
TCCGCTGATC AGGAGAAGGC GGCACGGATT GCCGGACAGT TAAAAGCAGG CAGGGTGTTG
ATCAATACGT TGAAGCATGA TCCATTGGCA CCGTTTGGAG GGTATAAGCA TTCCGGTATG
GGACGTGAGA ACGGTCAGTT GGGTATGGAG GCATTTTTAG AGCCGAAGAC CCTGATCATT
TGA
 
Protein sequence
MVFAENCPNQ ALKYNYFRPG SLFWPFNQLI VKRYPVFDKG KGSFDLENAF AGFHFVHFTQ 
NVFMSMEISP QFCTVGGIEI HFIYLITMNM KHIKSVYING RFATPHGNEV ASIVSPLDGE
VIAQLTYADE TDTEKAIQAA STALVNYAQS SLAERAEYLQ RIHDEILKRI DDLIDITILE
YGAPKERAKW SNMIAATTFL HQIAVMKDYP FKKTVHESTV VMEPIGVSAL FTPWNSTAGS
IAVKVAAALA AGCTIVLKPS EFSPWQSQII MECIDMAGLP PGVVNMVNGR GDVISRAIIA
SPEVTKISFT GSTVVGKILG KGAIDTMKRL TLELGGKSAN IILEDADLDT AIPMALQAGF
MNNGQACIAG SRLLVPVSRL EEIKKRLADG ATQFRVGDPY QDATRIGPLA SQKQYDRIQQ
FITTGLVEGA ELLYGGPGHP EGFDKGFYVK PTIFAGVKND MKIAREEIFG PVLSVIAYQD
EAEAIAIAND SDYGLMAYVS SADQEKAARI AGQLKAGRVL INTLKHDPLA PFGGYKHSGM
GRENGQLGME AFLEPKTLII