Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2086 |
Symbol | |
ID | 8358238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2552357 |
End bp | 2554627 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644964271 |
Product | signal transduction histidine kinase |
Protein accession | YP_003121780 |
Protein GI | 256421127 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACTGG AGCATGGAAC ATATTCTGAA AACATTACAC TTTGGAAACA GGTAAAACGG TGGCTGCTTT GCTGTATCCT ATCGCTCACC TGCATATCCG GCAGATTATA TGCACAATAT TATCCTGCCC CCGCACCTGT TGCAGCCAAT CAACTGCACA CATTATCTAC GCGATTAAAG ACTACACGTA ATGCACATGA GCGTATACAG ACACTAAATG CACTGTGTAA TCTCTACCAT AACCTGCCCT ATAAAAATCC GGCTGACCTT ACGCTTGCGG AACAATACGC TAAACAGGCA CTAGCAGAAG GTACCCGGAT AAACGACCAG GCAGGTATGT CTGAAGCATT ATTGTTGCTG GGACAATTAT ATTATTTCAG TGATGCGCTG GATAGTTTTG AGCAACTGCC CGGCAAAGCC AATGACTCAA CCAGAGCTAA ACTGTTCCTG CAACTCAGCT TCTACATCTG GGGAAGAGAC GCAAAAGACA AAACACAGGA CTATCTCAGG AGTAACGATT ACGCCAGAAA GGCTGCCGCA ATAACTGAAA GACTGGGTTT AAAAGACCTG ACACTGATGG CTGCGCGTAA TATTGCCATT AACAATTTAT ACCTGAAAAA GCCGGATGCT GAAGCGGACG TCCTTAAAAT CATTGCAACA TACAAACGGA CAGGATACAA AAAGCTCCAG TATATCTACT ACCCGCTGAC CTGTTATTTT GATTTTGTTC GTCAGACAGA TAAATCCTAT TACTATTCAG AAGCCGCGGT AACAGCAGTA GATGCCACCA GAGACACACT CTCCGCAGGT GACATTTACA TTGAAAAATC AGTACTGGCT TATCGCCGCG AAAAGTATGA GGAAGCAATA AACGCCTGTA AACAGGCATT GAAATACTAC GAACACCAAC CAAGCATATA TTATGTTTCT TCCCCTATGG TGCACGAGAT CATCAGTGCA GCTTACAACA AAATGGGTAA GAAAACAGAA GCAACCAACT ACATATTGAA TGCCCTGCAT CAATATCCGC CCCGTGGTAC CCAGGATAGT ATTACTTATC TTTACAGACT GGGAAATGCT TTTCGTGAAG AAAAAGCGTT TGATAAATCG GAAACCTATT TTAAACAGTT ATACGCCATT TCCAGCCGGC TGCACAAAGA TGAAGATTAT GCCAACATTA GTCTTGGCCA TGTTTACCTG GACGCCGGCG AGTTTGAAAA AGCCAGGCAC TATCTGTACA AAGGCTTATC CCTGGTGAAA CCGGAAGAAA ACACTGCTGG TCTGCGCTAC CTGCATTACA TGATCTACCT GGCTGATTCT GCCACACAAC ATTATCTTAC CGCAATAGAA CATTTGAATA AGAGCAATGA CCAGGCAGCC GCTGAAGCAA GATTAGAGCA GGATAAAGTA GTGAGACAAA TGGAAGTCGC CTACAAGGCC CGCGAAAAAG AACAGGAACT CAAGCTAAAA AATCAGAATA TCATATTCCT GCAACGACAG GCACAGGCGC AAAAGGAAAA ACTAAAACAA TCTGAAAAAA TTGGTTTGCT CACCGCTGGC GCCTTAGTCC TTGCCCTGGC CATCATGGTA TTACTCTTTT TCTTTTATCG CCAAAAACAA AAAAGCAGCC GGGAAATGAC GCATAAAAAC CAGCAATTGC AAAAGCTGGT TTCTGAAAAA GAGTGGCTCC TGAAAGAAGT ACATCACCGT GTAAAGAACA ATCTTCATAC TATATTTTGT CTCTTGGAAA GCCAGGCACG CACTGCTACA CCAGAAGCGC GCAATGCGCT TGAAAAAAGT ACGCATCGCA TTTATGCCAT GTCCCTTTTT CACCAGAAAG TTTATCAATC CGGCAATATT CAACAGGTCG ATTTCGGCAA CTATATGAGG GAGTTCCTGC TCTTTTTACA AGAGGGTTTT GATCTGGAAA CCAGGAACAT CAGGGTTACC CATGAGATGA CAAGCATCTC ATTGCCGCTC AATCTGGCAA TGCCGCTGGC ACTGATTGCA AATGAAGCGC TCACCAACGC CGCCAAATAT GCATTTGAGG GCAGGTCTTC CGGAGAAATC AACCTTTCAT TGCACCCGCA TGAACAGGCG TACAAGATGA CAATAAGCGA CGATGGCATA GGCATCACCC ATCCAGGTAG CTCAGATAGA CAATCCCTGG GAATGGAATT AATGCATGGA CTCTGTGCTG ATATAGGAGC CGCCATCAAC TTTGAAGTAA ATAATGGTAC CCGCATTAAT ATCGCTTTTA ATGCCGGTTA A
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Protein sequence | MLLEHGTYSE NITLWKQVKR WLLCCILSLT CISGRLYAQY YPAPAPVAAN QLHTLSTRLK TTRNAHERIQ TLNALCNLYH NLPYKNPADL TLAEQYAKQA LAEGTRINDQ AGMSEALLLL GQLYYFSDAL DSFEQLPGKA NDSTRAKLFL QLSFYIWGRD AKDKTQDYLR SNDYARKAAA ITERLGLKDL TLMAARNIAI NNLYLKKPDA EADVLKIIAT YKRTGYKKLQ YIYYPLTCYF DFVRQTDKSY YYSEAAVTAV DATRDTLSAG DIYIEKSVLA YRREKYEEAI NACKQALKYY EHQPSIYYVS SPMVHEIISA AYNKMGKKTE ATNYILNALH QYPPRGTQDS ITYLYRLGNA FREEKAFDKS ETYFKQLYAI SSRLHKDEDY ANISLGHVYL DAGEFEKARH YLYKGLSLVK PEENTAGLRY LHYMIYLADS ATQHYLTAIE HLNKSNDQAA AEARLEQDKV VRQMEVAYKA REKEQELKLK NQNIIFLQRQ AQAQKEKLKQ SEKIGLLTAG ALVLALAIMV LLFFFYRQKQ KSSREMTHKN QQLQKLVSEK EWLLKEVHHR VKNNLHTIFC LLESQARTAT PEARNALEKS THRIYAMSLF HQKVYQSGNI QQVDFGNYMR EFLLFLQEGF DLETRNIRVT HEMTSISLPL NLAMPLALIA NEALTNAAKY AFEGRSSGEI NLSLHPHEQA YKMTISDDGI GITHPGSSDR QSLGMELMHG LCADIGAAIN FEVNNGTRIN IAFNAG
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