| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2078 |
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| Symbol | |
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| ID | 8358230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2541089 |
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| End bp | 2541700 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644964263 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003121772 |
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| Protein GI | 256421119 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTACATTT ATAGGCATTA TTATATCACA TTGTCGAGTG AACAGTCATA CGAGGAAAAA
GAGTTGCTTG CCGCCATCGC CAAAGGGGAT ACCAGGGCCT TTGCAGCTAT ATTTAAAAAA
TACAGAATGC CTGTGTTTAT GCACACGCTC AGTATTATTA AATCTCCTGA AAGGGCGGAA
GAAATCACAC AGGACGTTTT TTTGAAAATA TGGCATTACC GCGAGGGCTT AGATCAGCTG
AACTCCTTCG AAAATTATCT TTTTATTGTA ACCCGCAACT ATACCATTTC AGAACTCCGC
AAAAAATTCA TTCCCACAGA TCCGGAAGTG GACCAGGCCT ATAGCTGGAC ACCAGAAAGG
CAGCTCCAGT TTAAAGAGCT GAGTAGCCGT CTGCATGAAA TCATTAACCG GCTTCCTCCC
CGCAGGAAAC AGGTGTTTGT CATGAGCCGC CTTGAAAATA AAACGCATCA GCAGATCGCC
GATGAACTAA AGATTTCGTC AGGGACAGTC AATCAGCAGC TGATGGCGGC TTTGAGCTTT
ATCAGGGCCG AACTGGCAGG GTTTCCGGAG CTCTGTATAT TATGGATATC GCTGTGTTCT
ATCTTTTTTT AA
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| Protein sequence | MYIYRHYYIT LSSEQSYEEK ELLAAIAKGD TRAFAAIFKK YRMPVFMHTL SIIKSPERAE
EITQDVFLKI WHYREGLDQL NSFENYLFIV TRNYTISELR KKFIPTDPEV DQAYSWTPER
QLQFKELSSR LHEIINRLPP RRKQVFVMSR LENKTHQQIA DELKISSGTV NQQLMAALSF
IRAELAGFPE LCILWISLCS IFF
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