Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2074 |
Symbol | |
ID | 8358226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2527164 |
End bp | 2529965 |
Gene Length | 2802 bp |
Protein Length | 933 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644964259 |
Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
Protein accession | YP_003121768 |
Protein GI | 256421115 |
COG category | [C] Energy production and conversion |
COG ID | [COG1049] Aconitase B |
TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGTT ATAATGAATA TCTTAAGGAA ATAGAAGAAA GAAAAGGTCA GGAACTGCAT CCAAAGCCGA TTGATGGTGC CGAATTGTTA AATGAAATCA TCGAACAAAT TAGAGATCTG GCAAATGTGC ACCGGAAAGA TTCTCTTAAT TTCTTCATTT ATAATGTGTT ACCAGGAACC ACGAGTGCAG CTGGTGTAAA AGCTAAGTTT TTAAAGGAGA TCATCCTTGG AACAGCTAAA GTAGAAGAAA TTACACCTGC TTTTGCTTTT GAGTTGTTAT CCCACATGAA AGGAGGTCCT TCCATTGAAG TGCTGCTGGA TCTGGCCCTG GGTAATGACG CGGCGATTGC AAAAGAAGCT GCTAAGGTGC TCAAAACACA GGTTTTCCTG TACGATGCGG ACACAGACCG CCTGAAAGAG GCATTCAAAA ATGAAAATCC GATAGCGAGA GAGATCATTG AAAGTTACGC TCAGGCTGAG TTTTTCACAA AACTGCCTGA AGTACCTGAA GAAATTAAGG TAGTGACTTT CATCGCTGGT GAAGGTGATA TTTCGACTGA CTTGCTCTCT CCTGGCAACC AGGCGCATTC CAGATCTGAC CGCGAACTGC ATGGTAAATG CATGATCACC CCTGCAGCAC AGGCTGAAAT CAAGAAATTA CAGGCAGAAC ACCCTGACAA GAGTGTGATG CTGATTGCTG ATAAAGGTAC CATGGGTGTA GGTTCATCAA GGATGTCCGG CGTAAACAAC GTGGCACTCT GGACAGGCAA ACAGGCAAGT CCTTATGTTC CATTTGTTAA CATTGCCCCT ATTGTAGGTG GTACTAATGG TATCTCCCCT ATCTTCCTCA CGACTGTTGA TGTTACCGGT GGTATCGGTA TTGACCTCAA AAACTGGGTA AAAAAGGTAG ACGAAAATGG TAAACTGATT CGTAATGAAG CTGGTGAACA TATTCTCGAA GAAGTATACT CTGTGGCTAC CGGCACCGTA CTGACAATCA ACACAAAGAA GAAGAAACTT TATAACGGCG ATAAAGAACT GATTGACATT TCCAAGGCAC TGACGCCGCA GAAAATGGAA TTTATCAGGG CTGGCGGATC ATATGCGATC GTATTTGGTA AAAAGATCCA GACTATCGCC GCAAAACTCC TGAACATCGA AATTCCCCCT GTATTCGCTC AGCCAAAAGA AATTTCTCAC GAAGGTCAGG GTCTGACAGC AGTAGAGAAA ATTTTTAACA GAAATGCCGT TGGCACAACT CCAGGTAAAG TATTACATGC TGGTTCAGAT GTTCGCGTAG AAGTGAACAT CGTAGGTTCT CAGGATACGA CTGGTCTGAT GACTGCTCAG GAACTGGAAT CTATGGCAGC AACCGTGATT TCGCCAATTG TGGATGGCGC CTACCAGTCA GGCTGTCACA CCGCTTCCGT ATGGGATAAA AAGGCACAGG CAAACATTCC AAAACTCATG AAATTCATGA ACGAATTTGG TCTGATCACT GCCCGTGACC CGAAAGGCGA ATATCACTCC ATGACAGACG TTATTCACAA AGTACTGAAC GATATTACGG TAGACGAGTG GGCAATCATC ATCGGTGGTG ACTCCCACAC AAGAATGTCC AAAGGTGTTG CCTTTGGTGC TGACTCAGGT ACCGTTGCCC TCGCACTGGC TACAGGTGAA GCATCCATGC CTATTCCGGA ATCAGTGAAA GTAACCTTCA AAGGAGAAAT GAAGGATCAC ATGGATTTCC GTGATGTGGT ACATGCTACA CAGGCACAGA TGCTGCAGAA ATTTGCAGGA GAGAACGTTT TCCAGGGCAG AGTCATTGAA GTGCATATCG GAACACTCCC TGCTGACCAG GCATTCACCT TCACCGACTG GACTGCAGAA ATGAAAGCAA AAGCTTCCAT CTGTATTTCT GAAGATGATA CCCTGATCCA ATCACTGGAA ATTGCTAAAG GCAGAATCCA GATCATGATT GATAAGGGTA TGGACAACAG CAGACAAGTA CTGCAGGGCC TGATCAACAG AGCTGATAAG AGAATCGCAG AAATTAAATC AGGTGAGAAA CCAGCTTTAA CGCCCGACGA GAACGCAAAA TATTATGCAG AAGTTGTAAT TGACCTGGAT GCTATCGTTG AACCAATGAT CGCGGATCCG GATGTTAATA ACGATGATGT TGCAAAACGA TATACCCATG ATACCATTCG TGCGCTCTCA TACTACAGCG GCGAGAAAAA AGTAGATCTT GGTTTCGTTG GATCTTGCAT GGTACACAAA GGTGACCTGA AAATTGTTTC TCAGATGCTC AGAAATCTGG AAAATCAGAA TGGCAAAGTT GAGTTCAATG CACCACTTGT AGTGGCAGCA CCAACCTACA ATATCATTGA TGAACTGCAG GTAGAAGGAG ATTGGGAAAT ACTTCAGAAA TATTCTGGTT TTGAATTCAA CGACAATGCT CCAAAAGGCG CTGCTCGTAC CGAATACGAA AACATGATGT ATCTTGAGCG TCCAGGTTGT AACCTTTGTA TGGGTAACCA GGAGAAAGCA GCTAAAGGTG ATACCGTAAT GGCTACCTCT ACGCGTCTTT TCCAGGGAAG AGTCGTTGAA GATTCTGATC GCAAAAAAGG TGAATCCCTG CTTGCATCTA CACCAGTAGT TGTTCTTTCT GCCATCCTTG GAAGAATTCC TAATATGGAA GAATATAAAG CAGCAGTAGT AGGTATCGAT CTGACGAAGT TCGCGCCTCC GCTGAAAAAC ATGACTACAA CCGCAACACG TACAGACAGT CTGTCTTACT AA
|
Protein sequence | MSRYNEYLKE IEERKGQELH PKPIDGAELL NEIIEQIRDL ANVHRKDSLN FFIYNVLPGT TSAAGVKAKF LKEIILGTAK VEEITPAFAF ELLSHMKGGP SIEVLLDLAL GNDAAIAKEA AKVLKTQVFL YDADTDRLKE AFKNENPIAR EIIESYAQAE FFTKLPEVPE EIKVVTFIAG EGDISTDLLS PGNQAHSRSD RELHGKCMIT PAAQAEIKKL QAEHPDKSVM LIADKGTMGV GSSRMSGVNN VALWTGKQAS PYVPFVNIAP IVGGTNGISP IFLTTVDVTG GIGIDLKNWV KKVDENGKLI RNEAGEHILE EVYSVATGTV LTINTKKKKL YNGDKELIDI SKALTPQKME FIRAGGSYAI VFGKKIQTIA AKLLNIEIPP VFAQPKEISH EGQGLTAVEK IFNRNAVGTT PGKVLHAGSD VRVEVNIVGS QDTTGLMTAQ ELESMAATVI SPIVDGAYQS GCHTASVWDK KAQANIPKLM KFMNEFGLIT ARDPKGEYHS MTDVIHKVLN DITVDEWAII IGGDSHTRMS KGVAFGADSG TVALALATGE ASMPIPESVK VTFKGEMKDH MDFRDVVHAT QAQMLQKFAG ENVFQGRVIE VHIGTLPADQ AFTFTDWTAE MKAKASICIS EDDTLIQSLE IAKGRIQIMI DKGMDNSRQV LQGLINRADK RIAEIKSGEK PALTPDENAK YYAEVVIDLD AIVEPMIADP DVNNDDVAKR YTHDTIRALS YYSGEKKVDL GFVGSCMVHK GDLKIVSQML RNLENQNGKV EFNAPLVVAA PTYNIIDELQ VEGDWEILQK YSGFEFNDNA PKGAARTEYE NMMYLERPGC NLCMGNQEKA AKGDTVMATS TRLFQGRVVE DSDRKKGESL LASTPVVVLS AILGRIPNME EYKAAVVGID LTKFAPPLKN MTTTATRTDS LSY
|
| |